Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF13O75888 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFSF13O75888 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNFSF13O75888 AL356740.2-201ENST00000601559 647 ntBASIC20.54■□□□□ 0.88
TNFSF13O75888 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFSF13O75888 MIR6722-201ENST00000617286 78 ntBASIC20.54■□□□□ 0.88
TNFSF13O75888 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFSF13O75888 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF13O75888 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF13O75888 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF13O75888 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF13O75888 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF13O75888 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF13O75888 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF13O75888 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
TNFSF13O75888 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF13O75888 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF13O75888 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFSF13O75888 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TNFSF13O75888 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFSF13O75888 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF13O75888 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF13O75888 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFSF13O75888 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF13O75888 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.52■□□□□ 0.88
TNFSF13O75888 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.52■□□□□ 0.88
TNFSF13O75888 MIR6089-201ENST00000616698 64 ntBASIC20.52■□□□□ 0.88
TNFSF13O75888 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.52■□□□□ 0.87
TNFSF13O75888 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF13O75888 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF13O75888 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF13O75888 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF13O75888 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.51■□□□□ 0.87
TNFSF13O75888 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF13O75888 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFSF13O75888 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFSF13O75888 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF13O75888 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
TNFSF13O75888 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF13O75888 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF13O75888 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.5■□□□□ 0.87
TNFSF13O75888 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF13O75888 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF13O75888 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF13O75888 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TNFSF13O75888 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF13O75888 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF13O75888 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF13O75888 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF13O75888 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.49■□□□□ 0.87
TNFSF13O75888 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TNFSF13O75888 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFSF13O75888 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.49■□□□□ 0.87
TNFSF13O75888 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TNFSF13O75888 AC004448.1-201ENST00000458332 883 ntBASIC20.49■□□□□ 0.87
TNFSF13O75888 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.49■□□□□ 0.87
TNFSF13O75888 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFSF13O75888 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF13O75888 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF13O75888 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF13O75888 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF13O75888 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF13O75888 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF13O75888 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFSF13O75888 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TNFSF13O75888 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF13O75888 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF13O75888 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFSF13O75888 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TNFSF13O75888 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.48■□□□□ 0.87
TNFSF13O75888 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFSF13O75888 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFSF13O75888 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFSF13O75888 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF13O75888 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFSF13O75888 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF13O75888 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF13O75888 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF13O75888 AL136116.3-201ENST00000402907 1138 ntBASIC20.47■□□□□ 0.87
TNFSF13O75888 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TNFSF13O75888 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFSF13O75888 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF13O75888 MIR4466-201ENST00000606121 54 ntBASIC20.47■□□□□ 0.87
TNFSF13O75888 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF13O75888 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF13O75888 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF13O75888 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.46■□□□□ 0.87
TNFSF13O75888 AL512631.2-201ENST00000604634 923 ntBASIC20.46■□□□□ 0.87
TNFSF13O75888 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TNFSF13O75888 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFSF13O75888 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF13O75888 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TNFSF13O75888 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.45■□□□□ 0.87
TNFSF13O75888 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TNFSF13O75888 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF13O75888 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF13O75888 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.45■□□□□ 0.86
TNFSF13O75888 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TNFSF13O75888 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.45■□□□□ 0.86
TNFSF13O75888 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms