Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
BRD4O60885 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
BRD4O60885 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
BRD4O60885 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
BRD4O60885 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
BRD4O60885 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
BRD4O60885 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.34■■■□□ 2.77
BRD4O60885 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC32.34■■■□□ 2.77
BRD4O60885 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
BRD4O60885 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
BRD4O60885 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
BRD4O60885 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
BRD4O60885 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC32.34■■■□□ 2.77
BRD4O60885 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.34■■■□□ 2.77
BRD4O60885 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
BRD4O60885 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
BRD4O60885 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.33■■■□□ 2.77
BRD4O60885 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
BRD4O60885 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
BRD4O60885 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC32.33■■■□□ 2.77
BRD4O60885 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
BRD4O60885 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC32.32■■■□□ 2.77
BRD4O60885 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC32.32■■■□□ 2.77
BRD4O60885 AC110285.6-201ENST00000617652 491 ntBASIC32.32■■■□□ 2.77
BRD4O60885 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC32.32■■■□□ 2.77
BRD4O60885 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
BRD4O60885 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
BRD4O60885 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.32■■■□□ 2.76
BRD4O60885 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC32.32■■■□□ 2.76
BRD4O60885 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
BRD4O60885 MIR4466-201ENST00000606121 54 ntBASIC32.32■■■□□ 2.76
BRD4O60885 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
BRD4O60885 AC097639.1-201ENST00000565519 1891 ntBASIC32.31■■■□□ 2.76
BRD4O60885 QDPR-206ENST00000508623 601 ntTSL 3 BASIC32.31■■■□□ 2.76
BRD4O60885 RALB-208ENST00000631312 311 ntTSL 5 BASIC32.31■■■□□ 2.76
BRD4O60885 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
BRD4O60885 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
BRD4O60885 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.3■■■□□ 2.76
BRD4O60885 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
BRD4O60885 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
BRD4O60885 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC32.29■■■□□ 2.76
BRD4O60885 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
BRD4O60885 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC32.29■■■□□ 2.76
BRD4O60885 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
BRD4O60885 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
BRD4O60885 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.28■■■□□ 2.76
BRD4O60885 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
BRD4O60885 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
BRD4O60885 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.28■■■□□ 2.76
BRD4O60885 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.28■■■□□ 2.76
BRD4O60885 AC133561.4-201ENST00000566112 224 ntBASIC32.28■■■□□ 2.76
BRD4O60885 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
BRD4O60885 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
BRD4O60885 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
BRD4O60885 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
BRD4O60885 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC32.27■■■□□ 2.76
BRD4O60885 FOXO3B-201ENST00000395675 1928 ntBASIC32.27■■■□□ 2.76
BRD4O60885 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
BRD4O60885 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC32.27■■■□□ 2.76
BRD4O60885 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
BRD4O60885 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
BRD4O60885 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC32.27■■■□□ 2.76
BRD4O60885 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
BRD4O60885 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.26■■■□□ 2.75
BRD4O60885 CD72-202ENST00000378430 585 ntTSL 3 BASIC32.26■■■□□ 2.75
BRD4O60885 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
BRD4O60885 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
BRD4O60885 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC32.26■■■□□ 2.75
BRD4O60885 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
BRD4O60885 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
BRD4O60885 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
BRD4O60885 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
BRD4O60885 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
BRD4O60885 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
BRD4O60885 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
BRD4O60885 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC32.25■■■□□ 2.75
BRD4O60885 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
BRD4O60885 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
BRD4O60885 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
BRD4O60885 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
BRD4O60885 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
BRD4O60885 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.23■■■□□ 2.75
BRD4O60885 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
BRD4O60885 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
BRD4O60885 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
BRD4O60885 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
BRD4O60885 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
BRD4O60885 TFPT-201ENST00000391757 774 ntTSL 5 BASIC32.22■■■□□ 2.75
BRD4O60885 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
BRD4O60885 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC32.22■■■□□ 2.75
BRD4O60885 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.22■■■□□ 2.75
BRD4O60885 SNX5-217ENST00000606557 1087 ntBASIC32.22■■■□□ 2.75
BRD4O60885 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
BRD4O60885 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
BRD4O60885 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
BRD4O60885 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC32.21■■■□□ 2.75
BRD4O60885 MIR6722-201ENST00000617286 78 ntBASIC32.21■■■□□ 2.75
BRD4O60885 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
BRD4O60885 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC32.21■■■□□ 2.75
BRD4O60885 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms