Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.95■□□□□ 0.94
SURF4O15260 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 AC007029.1-201ENST00000604183 313 ntBASIC20.95■□□□□ 0.94
SURF4O15260 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.95■□□□□ 0.94
SURF4O15260 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SURF4O15260 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SURF4O15260 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.95■□□□□ 0.94
SURF4O15260 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SURF4O15260 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SURF4O15260 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SURF4O15260 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SURF4O15260 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SURF4O15260 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SURF4O15260 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SURF4O15260 KRT18P10-201ENST00000388836 1287 ntBASIC20.93■□□□□ 0.94
SURF4O15260 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SURF4O15260 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SURF4O15260 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SURF4O15260 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
SURF4O15260 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.92■□□□□ 0.94
SURF4O15260 RAP2CP1-202ENST00000605179 643 ntBASIC20.92■□□□□ 0.94
SURF4O15260 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SURF4O15260 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.92■□□□□ 0.94
SURF4O15260 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
SURF4O15260 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.92■□□□□ 0.94
SURF4O15260 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SURF4O15260 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SURF4O15260 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SURF4O15260 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SURF4O15260 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SURF4O15260 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.91■□□□□ 0.94
SURF4O15260 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SURF4O15260 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.91■□□□□ 0.94
SURF4O15260 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.91■□□□□ 0.94
SURF4O15260 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.91■□□□□ 0.94
SURF4O15260 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SURF4O15260 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SURF4O15260 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.9■□□□□ 0.94
SURF4O15260 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SURF4O15260 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.9■□□□□ 0.94
SURF4O15260 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
SURF4O15260 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SURF4O15260 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SURF4O15260 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.89■□□□□ 0.94
SURF4O15260 RARRES2P2-201ENST00000394842 485 ntBASIC20.89■□□□□ 0.93
SURF4O15260 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.89■□□□□ 0.93
SURF4O15260 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SURF4O15260 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SURF4O15260 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SURF4O15260 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SURF4O15260 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SURF4O15260 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SURF4O15260 AC026202.3-201ENST00000600805 1127 ntBASIC20.88■□□□□ 0.93
SURF4O15260 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SURF4O15260 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SURF4O15260 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SURF4O15260 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SURF4O15260 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.87■□□□□ 0.93
SURF4O15260 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SURF4O15260 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SURF4O15260 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SURF4O15260 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SURF4O15260 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.87■□□□□ 0.93
SURF4O15260 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.87■□□□□ 0.93
SURF4O15260 C9orf163-202ENST00000624034 2573 ntBASIC20.87■□□□□ 0.93
SURF4O15260 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SURF4O15260 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SURF4O15260 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.86■□□□□ 0.93
SURF4O15260 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SURF4O15260 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.86■□□□□ 0.93
SURF4O15260 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SURF4O15260 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SURF4O15260 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SURF4O15260 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.85■□□□□ 0.93
SURF4O15260 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SURF4O15260 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SURF4O15260 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.85■□□□□ 0.93
SURF4O15260 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SURF4O15260 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.85■□□□□ 0.93
SURF4O15260 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.85■□□□□ 0.93
SURF4O15260 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms