Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rundc3aO08576 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rundc3aO08576 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rundc3aO08576 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rundc3aO08576 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rundc3aO08576 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Rundc3aO08576 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.32■□□□□ 0.84
Rundc3aO08576 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rundc3aO08576 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.32■□□□□ 0.84
Rundc3aO08576 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rundc3aO08576 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.32■□□□□ 0.84
Rundc3aO08576 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.31■□□□□ 0.84
Rundc3aO08576 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.31■□□□□ 0.84
Rundc3aO08576 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.31■□□□□ 0.84
Rundc3aO08576 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rundc3aO08576 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.31■□□□□ 0.84
Rundc3aO08576 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rundc3aO08576 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rundc3aO08576 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rundc3aO08576 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rundc3aO08576 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rundc3aO08576 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rundc3aO08576 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rundc3aO08576 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rundc3aO08576 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rundc3aO08576 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.3■□□□□ 0.84
Rundc3aO08576 Gm12366-201ENSMUST00000121722 873 ntBASIC20.3■□□□□ 0.84
Rundc3aO08576 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.3■□□□□ 0.84
Rundc3aO08576 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.3■□□□□ 0.84
Rundc3aO08576 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.3■□□□□ 0.84
Rundc3aO08576 Gm5786-201ENSMUST00000085368 882 ntBASIC20.3■□□□□ 0.84
Rundc3aO08576 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rundc3aO08576 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rundc3aO08576 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.29■□□□□ 0.84
Rundc3aO08576 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rundc3aO08576 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
Rundc3aO08576 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Rundc3aO08576 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rundc3aO08576 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.27■□□□□ 0.84
Rundc3aO08576 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rundc3aO08576 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rundc3aO08576 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rundc3aO08576 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rundc3aO08576 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rundc3aO08576 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rundc3aO08576 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rundc3aO08576 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rundc3aO08576 Gm10420-201ENSMUST00000121713 882 ntBASIC20.26■□□□□ 0.83
Rundc3aO08576 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rundc3aO08576 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rundc3aO08576 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rundc3aO08576 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rundc3aO08576 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rundc3aO08576 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rundc3aO08576 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rundc3aO08576 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Rundc3aO08576 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rundc3aO08576 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rundc3aO08576 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rundc3aO08576 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rundc3aO08576 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rundc3aO08576 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rundc3aO08576 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Rundc3aO08576 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rundc3aO08576 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rundc3aO08576 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rundc3aO08576 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms