Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Gm9870-201ENSMUST00000063874 645 ntBASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Gm5576-201ENSMUST00000075809 1236 ntBASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC6.27□□□□□ -1.41
Hmcn1D3YXG0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmcn1D3YXG0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Gm13836-201ENSMUST00000121159 501 ntBASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Fezf2-202ENSMUST00000224023 1917 ntBASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Gm29241-201ENSMUST00000189260 1096 ntBASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hmcn1D3YXG0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Gm25925-201ENSMUST00000158314 306 ntBASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Gm6085-201ENSMUST00000182774 1470 ntBASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC6.24□□□□□ -1.41
Hmcn1D3YXG0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmcn1D3YXG0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmcn1D3YXG0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms