Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trbv13-2A0A140T8N6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-2A0A140T8N6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trbv13-2A0A140T8N6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv13-2A0A140T8N6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trbv13-2A0A140T8N6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trbv13-2A0A140T8N6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv13-2A0A140T8N6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trbv13-2A0A140T8N6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv13-2A0A140T8N6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv13-2A0A140T8N6 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.5□□□□□ -0.09
Trbv13-2A0A140T8N6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-2A0A140T8N6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-2A0A140T8N6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-2A0A140T8N6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-2A0A140T8N6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-2A0A140T8N6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-2A0A140T8N6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-2A0A140T8N6 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.47□□□□□ -0.09
Trbv13-2A0A140T8N6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-2A0A140T8N6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-2A0A140T8N6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms