Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.62■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Rarb-207ENSMUST00000225921 2756 ntBASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.59■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Tcrg-V4A0A0B4J1J8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 217.7 ms