Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.52■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv12-2A0A0B4J1H1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv12-2A0A0B4J1H1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-2A0A0B4J1H1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gm44428-201ENSMUST00000204474 874 ntBASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gm8503-201ENSMUST00000118131 455 ntBASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv12-2A0A0B4J1H1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-2A0A0B4J1H1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.47■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.47■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv12-2A0A0B4J1H1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv12-2A0A0B4J1H1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms