Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-7A0A075B6B0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Gm5812-201ENSMUST00000061073 957 ntBASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav6d-7A0A075B6B0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-7A0A075B6B0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-7A0A075B6B0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-7A0A075B6B0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav6d-7A0A075B6B0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-7A0A075B6B0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav6d-7A0A075B6B0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6d-7A0A075B6B0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav6d-7A0A075B6B0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav6d-7A0A075B6B0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6d-7A0A075B6B0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-7A0A075B6B0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Gm15546-201ENSMUST00000122095 826 ntBASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-7A0A075B6B0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trav6d-7A0A075B6B0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav6d-7A0A075B6B0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Gm45444-201ENSMUST00000211394 898 ntBASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-7A0A075B6B0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms