Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.97□□□□□ -0.17
Trav13-2A0A075B649 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13-2A0A075B649 Hsf1-207ENSMUST00000228371 2102 ntBASIC13.95□□□□□ -0.18
Trav13-2A0A075B649 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-2A0A075B649 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13-2A0A075B649 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-2A0A075B649 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Notumos-201ENSMUST00000151998 2659 ntBASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-2A0A075B649 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav13-2A0A075B649 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Gm44428-201ENSMUST00000204474 874 ntBASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-2A0A075B649 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 AC117769.4-201ENSMUST00000225679 685 ntBASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-2A0A075B649 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13-2A0A075B649 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13-2A0A075B649 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Gm6311-201ENSMUST00000073790 878 ntBASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-2A0A075B649 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms