Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
PARPBPQ9NWS1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
PARPBPQ9NWS1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PARPBPQ9NWS1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PARPBPQ9NWS1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.76■□□□□ 0.91
PARPBPQ9NWS1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PARPBPQ9NWS1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PARPBPQ9NWS1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PARPBPQ9NWS1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PARPBPQ9NWS1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 MIR6089-201ENST00000616698 64 ntBASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PARPBPQ9NWS1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 AC022211.4-201ENST00000625094 2161 ntBASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PARPBPQ9NWS1 AC020928.2-201ENST00000588717 2197 ntBASIC20.73■□□□□ 0.91
PARPBPQ9NWS1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PARPBPQ9NWS1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.73■□□□□ 0.91
PARPBPQ9NWS1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PARPBPQ9NWS1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.73■□□□□ 0.91
PARPBPQ9NWS1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PARPBPQ9NWS1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PARPBPQ9NWS1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 AC142381.3-201ENST00000568208 1670 ntBASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 AP003733.4-201ENST00000623785 1697 ntBASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PARPBPQ9NWS1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.7■□□□□ 0.91
PARPBPQ9NWS1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PARPBPQ9NWS1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PARPBPQ9NWS1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PARPBPQ9NWS1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.68■□□□□ 0.9
PARPBPQ9NWS1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PARPBPQ9NWS1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms