Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.92■■■□□ 2.06
DDX4Q9NQI0 MIR4466-201ENST00000606121 54 ntBASIC27.92■■■□□ 2.06
DDX4Q9NQI0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.91■■■□□ 2.06
DDX4Q9NQI0 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.91■■■□□ 2.06
DDX4Q9NQI0 SNX5-217ENST00000606557 1087 ntBASIC27.91■■■□□ 2.06
DDX4Q9NQI0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
DDX4Q9NQI0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.91■■■□□ 2.06
DDX4Q9NQI0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
DDX4Q9NQI0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.9■■■□□ 2.06
DDX4Q9NQI0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
DDX4Q9NQI0 AL136116.3-201ENST00000402907 1138 ntBASIC27.9■■■□□ 2.06
DDX4Q9NQI0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.89■■■□□ 2.06
DDX4Q9NQI0 AL512631.2-201ENST00000604634 923 ntBASIC27.89■■■□□ 2.06
DDX4Q9NQI0 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.89■■■□□ 2.06
DDX4Q9NQI0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
DDX4Q9NQI0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.88■■■□□ 2.05
DDX4Q9NQI0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
DDX4Q9NQI0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
DDX4Q9NQI0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 MIR638-201ENST00000385237 100 ntBASIC27.87■■■□□ 2.05
DDX4Q9NQI0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 AL356740.2-201ENST00000601559 647 ntBASIC27.87■■■□□ 2.05
DDX4Q9NQI0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
DDX4Q9NQI0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
DDX4Q9NQI0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.86■■■□□ 2.05
DDX4Q9NQI0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.86■■■□□ 2.05
DDX4Q9NQI0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
DDX4Q9NQI0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
DDX4Q9NQI0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
DDX4Q9NQI0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.84■■■□□ 2.05
DDX4Q9NQI0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
DDX4Q9NQI0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.84■■■□□ 2.05
DDX4Q9NQI0 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.84■■■□□ 2.05
DDX4Q9NQI0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.84■■■□□ 2.05
DDX4Q9NQI0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.84■■■□□ 2.05
DDX4Q9NQI0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
DDX4Q9NQI0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
DDX4Q9NQI0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
DDX4Q9NQI0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
DDX4Q9NQI0 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.82■■■□□ 2.04
DDX4Q9NQI0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.82■■■□□ 2.04
DDX4Q9NQI0 AL139246.5-201ENST00000606645 996 ntBASIC27.82■■■□□ 2.04
DDX4Q9NQI0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.82■■■□□ 2.04
DDX4Q9NQI0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
DDX4Q9NQI0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.81■■■□□ 2.04
DDX4Q9NQI0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
DDX4Q9NQI0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.81■■■□□ 2.04
DDX4Q9NQI0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
DDX4Q9NQI0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
DDX4Q9NQI0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.81■■■□□ 2.04
DDX4Q9NQI0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 AC110285.6-201ENST00000617652 491 ntBASIC27.8■■■□□ 2.04
DDX4Q9NQI0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
DDX4Q9NQI0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.79■■■□□ 2.04
DDX4Q9NQI0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.78■■■□□ 2.04
DDX4Q9NQI0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
DDX4Q9NQI0 MIR6722-201ENST00000617286 78 ntBASIC27.78■■■□□ 2.04
DDX4Q9NQI0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
DDX4Q9NQI0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.77■■■□□ 2.04
DDX4Q9NQI0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
DDX4Q9NQI0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
DDX4Q9NQI0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
DDX4Q9NQI0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
DDX4Q9NQI0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.76■■■□□ 2.03
DDX4Q9NQI0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
DDX4Q9NQI0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
DDX4Q9NQI0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.76■■■□□ 2.03
DDX4Q9NQI0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.76■■■□□ 2.03
DDX4Q9NQI0 SLC6A10P-202ENST00000431994 2058 ntBASIC27.76■■■□□ 2.03
DDX4Q9NQI0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
DDX4Q9NQI0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
DDX4Q9NQI0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
DDX4Q9NQI0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.75■■■□□ 2.03
DDX4Q9NQI0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
DDX4Q9NQI0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms