Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmgn3Q9DCB1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgn3Q9DCB1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgn3Q9DCB1 Gm8503-201ENSMUST00000118131 455 ntBASIC19.73■□□□□ 0.75
Hmgn3Q9DCB1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.73■□□□□ 0.75
Hmgn3Q9DCB1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.73■□□□□ 0.75
Hmgn3Q9DCB1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Hmgn3Q9DCB1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmgn3Q9DCB1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hmgn3Q9DCB1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hmgn3Q9DCB1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.7■□□□□ 0.74
Hmgn3Q9DCB1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmgn3Q9DCB1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmgn3Q9DCB1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn3Q9DCB1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn3Q9DCB1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hmgn3Q9DCB1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn3Q9DCB1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn3Q9DCB1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn3Q9DCB1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmgn3Q9DCB1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hmgn3Q9DCB1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn3Q9DCB1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn3Q9DCB1 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.66■□□□□ 0.74
Hmgn3Q9DCB1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Hmgn3Q9DCB1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmgn3Q9DCB1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmgn3Q9DCB1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn3Q9DCB1 Gm9812-201ENSMUST00000061934 968 ntBASIC19.65■□□□□ 0.74
Hmgn3Q9DCB1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmgn3Q9DCB1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn3Q9DCB1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgn3Q9DCB1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgn3Q9DCB1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Hmgn3Q9DCB1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgn3Q9DCB1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.74
Hmgn3Q9DCB1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn3Q9DCB1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn3Q9DCB1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn3Q9DCB1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgn3Q9DCB1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hmgn3Q9DCB1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn3Q9DCB1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgn3Q9DCB1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms