Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mbd3l1Q9D9H3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mbd3l1Q9D9H3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mbd3l1Q9D9H3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mbd3l1Q9D9H3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.2■□□□□ 0.5
Mbd3l1Q9D9H3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Mbd3l1Q9D9H3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mbd3l1Q9D9H3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mbd3l1Q9D9H3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Mbd3l1Q9D9H3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mbd3l1Q9D9H3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mbd3l1Q9D9H3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mbd3l1Q9D9H3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mbd3l1Q9D9H3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mbd3l1Q9D9H3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mbd3l1Q9D9H3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mbd3l1Q9D9H3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mbd3l1Q9D9H3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mbd3l1Q9D9H3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mbd3l1Q9D9H3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.14■□□□□ 0.49
Mbd3l1Q9D9H3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mbd3l1Q9D9H3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mbd3l1Q9D9H3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mbd3l1Q9D9H3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Mbd3l1Q9D9H3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mbd3l1Q9D9H3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mbd3l1Q9D9H3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mbd3l1Q9D9H3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mbd3l1Q9D9H3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.11■□□□□ 0.49
Mbd3l1Q9D9H3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms