Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.23■□□□□ 0.99
Retreg3Q9CQV4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retreg3Q9CQV4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retreg3Q9CQV4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retreg3Q9CQV4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.22■□□□□ 0.99
Retreg3Q9CQV4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Retreg3Q9CQV4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retreg3Q9CQV4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retreg3Q9CQV4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retreg3Q9CQV4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retreg3Q9CQV4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.2■□□□□ 0.98
Retreg3Q9CQV4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retreg3Q9CQV4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retreg3Q9CQV4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg3Q9CQV4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg3Q9CQV4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg3Q9CQV4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg3Q9CQV4 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.18■□□□□ 0.98
Retreg3Q9CQV4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg3Q9CQV4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retreg3Q9CQV4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retreg3Q9CQV4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Retreg3Q9CQV4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Retreg3Q9CQV4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retreg3Q9CQV4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retreg3Q9CQV4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg3Q9CQV4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retreg3Q9CQV4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retreg3Q9CQV4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.15■□□□□ 0.98
Retreg3Q9CQV4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Retreg3Q9CQV4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.14■□□□□ 0.97
Retreg3Q9CQV4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Retreg3Q9CQV4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Retreg3Q9CQV4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Retreg3Q9CQV4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retreg3Q9CQV4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Gm14117-201ENSMUST00000122417 843 ntBASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retreg3Q9CQV4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Gm10232-201ENSMUST00000089221 720 ntBASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retreg3Q9CQV4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg3Q9CQV4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg3Q9CQV4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg3Q9CQV4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg3Q9CQV4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.1■□□□□ 0.97
Retreg3Q9CQV4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.1■□□□□ 0.97
Retreg3Q9CQV4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retreg3Q9CQV4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Retreg3Q9CQV4 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.08■□□□□ 0.97
Retreg3Q9CQV4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg3Q9CQV4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg3Q9CQV4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retreg3Q9CQV4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.08■□□□□ 0.97
Retreg3Q9CQV4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms