Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMSS1Q9BQ75 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMSS1Q9BQ75 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CMSS1Q9BQ75 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMSS1Q9BQ75 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CMSS1Q9BQ75 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CMSS1Q9BQ75 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CMSS1Q9BQ75 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 MIR6089-201ENST00000616698 64 ntBASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CMSS1Q9BQ75 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.78■□□□□ 0.76
CMSS1Q9BQ75 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CMSS1Q9BQ75 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMSS1Q9BQ75 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMSS1Q9BQ75 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.77■□□□□ 0.76
CMSS1Q9BQ75 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMSS1Q9BQ75 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMSS1Q9BQ75 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CMSS1Q9BQ75 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CMSS1Q9BQ75 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMSS1Q9BQ75 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CMSS1Q9BQ75 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CMSS1Q9BQ75 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.76■□□□□ 0.75
CMSS1Q9BQ75 AC092296.2-201ENST00000589470 999 ntBASIC19.76■□□□□ 0.75
CMSS1Q9BQ75 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.76■□□□□ 0.75
CMSS1Q9BQ75 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CMSS1Q9BQ75 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 RP9P-202ENST00000450133 1212 ntBASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CMSS1Q9BQ75 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CMSS1Q9BQ75 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.74■□□□□ 0.75
CMSS1Q9BQ75 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.74■□□□□ 0.75
CMSS1Q9BQ75 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.74■□□□□ 0.75
CMSS1Q9BQ75 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CMSS1Q9BQ75 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMSS1Q9BQ75 AC004812.2-201ENST00000611079 2094 ntBASIC19.73■□□□□ 0.75
CMSS1Q9BQ75 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMSS1Q9BQ75 ECEL1P2-201ENST00000461596 1295 ntBASIC19.73■□□□□ 0.75
CMSS1Q9BQ75 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMSS1Q9BQ75 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CMSS1Q9BQ75 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.73■□□□□ 0.75
CMSS1Q9BQ75 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.72■□□□□ 0.75
CMSS1Q9BQ75 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CMSS1Q9BQ75 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.71■□□□□ 0.75
CMSS1Q9BQ75 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMSS1Q9BQ75 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.71■□□□□ 0.75
CMSS1Q9BQ75 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CMSS1Q9BQ75 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CMSS1Q9BQ75 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 AC093536.1-201ENST00000569153 554 ntBASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms