Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.65■■□□□ 1.54
SMOQ99835 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
SMOQ99835 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SMOQ99835 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMOQ99835 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SMOQ99835 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SMOQ99835 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.65■■□□□ 1.54
SMOQ99835 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SMOQ99835 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.65■■□□□ 1.54
SMOQ99835 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMOQ99835 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SMOQ99835 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SMOQ99835 AC022211.4-201ENST00000625094 2161 ntBASIC24.64■■□□□ 1.53
SMOQ99835 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SMOQ99835 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMOQ99835 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMOQ99835 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMOQ99835 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SMOQ99835 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SMOQ99835 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMOQ99835 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.63■■□□□ 1.53
SMOQ99835 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMOQ99835 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.63■■□□□ 1.53
SMOQ99835 KRT125P-201ENST00000546827 989 ntBASIC24.63■■□□□ 1.53
SMOQ99835 MIR4787-201ENST00000607364 84 ntBASIC24.63■■□□□ 1.53
SMOQ99835 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SMOQ99835 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.63■■□□□ 1.53
SMOQ99835 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SMOQ99835 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.63■■□□□ 1.53
SMOQ99835 AC020928.2-201ENST00000588717 2197 ntBASIC24.63■■□□□ 1.53
SMOQ99835 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.62■■□□□ 1.53
SMOQ99835 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.62■■□□□ 1.53
SMOQ99835 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.62■■□□□ 1.53
SMOQ99835 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SMOQ99835 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SMOQ99835 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMOQ99835 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SMOQ99835 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMOQ99835 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.61■■□□□ 1.53
SMOQ99835 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMOQ99835 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMOQ99835 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SMOQ99835 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SMOQ99835 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.61■■□□□ 1.53
SMOQ99835 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMOQ99835 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMOQ99835 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SMOQ99835 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.6■■□□□ 1.53
SMOQ99835 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.6■■□□□ 1.53
SMOQ99835 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SMOQ99835 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.6■■□□□ 1.53
SMOQ99835 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.6■■□□□ 1.53
SMOQ99835 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMOQ99835 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SMOQ99835 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SMOQ99835 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.59■■□□□ 1.53
SMOQ99835 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.59■■□□□ 1.53
SMOQ99835 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.59■■□□□ 1.53
SMOQ99835 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.59■■□□□ 1.53
SMOQ99835 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
SMOQ99835 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
SMOQ99835 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.58■■□□□ 1.53
SMOQ99835 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SMOQ99835 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SMOQ99835 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.57■■□□□ 1.52
SMOQ99835 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMOQ99835 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMOQ99835 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMOQ99835 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SMOQ99835 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMOQ99835 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMOQ99835 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.56■■□□□ 1.52
SMOQ99835 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.56■■□□□ 1.52
SMOQ99835 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.56■■□□□ 1.52
SMOQ99835 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMOQ99835 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMOQ99835 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.55■■□□□ 1.52
SMOQ99835 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.55■■□□□ 1.52
SMOQ99835 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.55■■□□□ 1.52
SMOQ99835 AC092028.1-203ENST00000608262 953 ntBASIC24.55■■□□□ 1.52
SMOQ99835 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMOQ99835 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMOQ99835 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMOQ99835 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.54■■□□□ 1.52
SMOQ99835 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMOQ99835 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMOQ99835 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMOQ99835 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMOQ99835 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
SMOQ99835 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMOQ99835 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
SMOQ99835 UNC93B8-201ENST00000511903 705 ntBASIC24.53■■□□□ 1.52
SMOQ99835 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms