Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 BHLHE23-202ENST00000612929 1109 ntBASIC19.17■□□□□ 0.66
R3HDM4Q96D70 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 AC093536.1-201ENST00000569153 554 ntBASIC19.16■□□□□ 0.66
R3HDM4Q96D70 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
R3HDM4Q96D70 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.15■□□□□ 0.66
R3HDM4Q96D70 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
R3HDM4Q96D70 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.14■□□□□ 0.66
R3HDM4Q96D70 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
R3HDM4Q96D70 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
R3HDM4Q96D70 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
R3HDM4Q96D70 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
R3HDM4Q96D70 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.14■□□□□ 0.65
R3HDM4Q96D70 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HDM4Q96D70 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HDM4Q96D70 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HDM4Q96D70 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
R3HDM4Q96D70 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.14■□□□□ 0.65
R3HDM4Q96D70 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HDM4Q96D70 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
R3HDM4Q96D70 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
R3HDM4Q96D70 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.12■□□□□ 0.65
R3HDM4Q96D70 DUX4L9-201ENST00000449051 1259 ntBASIC19.12■□□□□ 0.65
R3HDM4Q96D70 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
R3HDM4Q96D70 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.12■□□□□ 0.65
R3HDM4Q96D70 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM4Q96D70 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM4Q96D70 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HDM4Q96D70 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM4Q96D70 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HDM4Q96D70 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM4Q96D70 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HDM4Q96D70 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM4Q96D70 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HDM4Q96D70 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM4Q96D70 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM4Q96D70 AC141586.4-201ENST00000624558 1573 ntBASIC19.1■□□□□ 0.65
R3HDM4Q96D70 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HDM4Q96D70 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 AC139795.1-202ENST00000500444 432 ntBASIC19.09■□□□□ 0.65
R3HDM4Q96D70 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HDM4Q96D70 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
R3HDM4Q96D70 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
R3HDM4Q96D70 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.08■□□□□ 0.65
R3HDM4Q96D70 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
R3HDM4Q96D70 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
R3HDM4Q96D70 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.08■□□□□ 0.65
R3HDM4Q96D70 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
R3HDM4Q96D70 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
R3HDM4Q96D70 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
R3HDM4Q96D70 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
R3HDM4Q96D70 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms