Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim60Q8VI40 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim60Q8VI40 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim60Q8VI40 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Trim60Q8VI40 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.73■■□□□ 1.07
Trim60Q8VI40 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim60Q8VI40 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Trim60Q8VI40 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim60Q8VI40 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Trim60Q8VI40 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim60Q8VI40 Gm14523-201ENSMUST00000117260 558 ntBASIC21.7■■□□□ 1.06
Trim60Q8VI40 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim60Q8VI40 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim60Q8VI40 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim60Q8VI40 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim60Q8VI40 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim60Q8VI40 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim60Q8VI40 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim60Q8VI40 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim60Q8VI40 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim60Q8VI40 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim60Q8VI40 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
Trim60Q8VI40 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim60Q8VI40 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim60Q8VI40 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.68■■□□□ 1.06
Trim60Q8VI40 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim60Q8VI40 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim60Q8VI40 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim60Q8VI40 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim60Q8VI40 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim60Q8VI40 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.67■■□□□ 1.06
Trim60Q8VI40 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.67■■□□□ 1.06
Trim60Q8VI40 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim60Q8VI40 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Trim60Q8VI40 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim60Q8VI40 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.66■■□□□ 1.06
Trim60Q8VI40 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Gm27502-201ENSMUST00000183495 199 ntBASIC21.65■■□□□ 1.06
Trim60Q8VI40 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim60Q8VI40 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim60Q8VI40 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim60Q8VI40 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trim60Q8VI40 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim60Q8VI40 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim60Q8VI40 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Trim60Q8VI40 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim60Q8VI40 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim60Q8VI40 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.63■■□□□ 1.05
Trim60Q8VI40 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trim60Q8VI40 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim60Q8VI40 Gm7332-201ENSMUST00000118351 454 ntBASIC21.63■■□□□ 1.05
Trim60Q8VI40 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.63■■□□□ 1.05
Trim60Q8VI40 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.63■■□□□ 1.05
Trim60Q8VI40 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.63■■□□□ 1.05
Trim60Q8VI40 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.63■■□□□ 1.05
Trim60Q8VI40 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim60Q8VI40 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim60Q8VI40 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim60Q8VI40 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim60Q8VI40 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim60Q8VI40 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim60Q8VI40 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim60Q8VI40 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim60Q8VI40 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim60Q8VI40 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.62■■□□□ 1.05
Trim60Q8VI40 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim60Q8VI40 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim60Q8VI40 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim60Q8VI40 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim60Q8VI40 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim60Q8VI40 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim60Q8VI40 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms