Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
FNDC9Q8TBE3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.96■□□□□ 0.95
FNDC9Q8TBE3 KRT125P-201ENST00000546827 989 ntBASIC20.96■□□□□ 0.95
FNDC9Q8TBE3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNDC9Q8TBE3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FNDC9Q8TBE3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 AC137630.3-201ENST00000607245 391 ntBASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.95■□□□□ 0.94
FNDC9Q8TBE3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FNDC9Q8TBE3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
FNDC9Q8TBE3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.94■□□□□ 0.94
FNDC9Q8TBE3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.94■□□□□ 0.94
FNDC9Q8TBE3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FNDC9Q8TBE3 AC090877.2-201ENST00000558441 1738 ntBASIC20.94■□□□□ 0.94
FNDC9Q8TBE3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FNDC9Q8TBE3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.93■□□□□ 0.94
FNDC9Q8TBE3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FNDC9Q8TBE3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FNDC9Q8TBE3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 MIR4787-201ENST00000607364 84 ntBASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FNDC9Q8TBE3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FNDC9Q8TBE3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.91■□□□□ 0.94
FNDC9Q8TBE3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.91■□□□□ 0.94
FNDC9Q8TBE3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FNDC9Q8TBE3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
FNDC9Q8TBE3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.91■□□□□ 0.94
FNDC9Q8TBE3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
FNDC9Q8TBE3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 AC021242.3-201ENST00000607598 1377 ntBASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
FNDC9Q8TBE3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.89■□□□□ 0.94
FNDC9Q8TBE3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FNDC9Q8TBE3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC9Q8TBE3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC9Q8TBE3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC9Q8TBE3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC9Q8TBE3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.87■□□□□ 0.93
FNDC9Q8TBE3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC9Q8TBE3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.87■□□□□ 0.93
FNDC9Q8TBE3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC9Q8TBE3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC9Q8TBE3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC9Q8TBE3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
FNDC9Q8TBE3 AF131216.4-201ENST00000638924 1588 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms