Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM1BQ8NB78 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.9■■□□□ 1.42
KDM1BQ8NB78 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.9■■□□□ 1.42
KDM1BQ8NB78 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.9■■□□□ 1.42
KDM1BQ8NB78 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.89■■□□□ 1.42
KDM1BQ8NB78 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.89■■□□□ 1.41
KDM1BQ8NB78 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.89■■□□□ 1.41
KDM1BQ8NB78 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.89■■□□□ 1.41
KDM1BQ8NB78 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KDM1BQ8NB78 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM1BQ8NB78 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
KDM1BQ8NB78 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM1BQ8NB78 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM1BQ8NB78 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.87■■□□□ 1.41
KDM1BQ8NB78 AC092028.1-203ENST00000608262 953 ntBASIC23.87■■□□□ 1.41
KDM1BQ8NB78 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
KDM1BQ8NB78 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1BQ8NB78 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KDM1BQ8NB78 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
KDM1BQ8NB78 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
KDM1BQ8NB78 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM1BQ8NB78 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KDM1BQ8NB78 AC090877.2-201ENST00000558441 1738 ntBASIC23.86■■□□□ 1.41
KDM1BQ8NB78 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
KDM1BQ8NB78 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1BQ8NB78 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1BQ8NB78 UNC93B8-201ENST00000511903 705 ntBASIC23.85■■□□□ 1.41
KDM1BQ8NB78 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.85■■□□□ 1.41
KDM1BQ8NB78 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1BQ8NB78 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KDM1BQ8NB78 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 AC131212.1-201ENST00000613771 668 ntBASIC23.84■■□□□ 1.41
KDM1BQ8NB78 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.84■■□□□ 1.41
KDM1BQ8NB78 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 AC093323.1-202ENST00000635031 2045 ntBASIC23.83■■□□□ 1.41
KDM1BQ8NB78 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
KDM1BQ8NB78 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.83■■□□□ 1.4
KDM1BQ8NB78 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
KDM1BQ8NB78 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.82■■□□□ 1.4
KDM1BQ8NB78 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KDM1BQ8NB78 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM1BQ8NB78 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
KDM1BQ8NB78 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
KDM1BQ8NB78 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM1BQ8NB78 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.81■■□□□ 1.4
KDM1BQ8NB78 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KDM1BQ8NB78 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KDM1BQ8NB78 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM1BQ8NB78 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM1BQ8NB78 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
KDM1BQ8NB78 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.8■■□□□ 1.4
KDM1BQ8NB78 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.8■■□□□ 1.4
KDM1BQ8NB78 KRT16P3-201ENST00000439127 1283 ntBASIC23.8■■□□□ 1.4
KDM1BQ8NB78 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
KDM1BQ8NB78 AF131216.4-201ENST00000638924 1588 ntBASIC23.8■■□□□ 1.4
KDM1BQ8NB78 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM1BQ8NB78 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM1BQ8NB78 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM1BQ8NB78 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM1BQ8NB78 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
KDM1BQ8NB78 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms