Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 AC022616.5-201ENST00000518796 181 ntBASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.92■■□□□ 1.74
CCDC65Q8IXS2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 LINC01124-201ENST00000409786 2117 ntBASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 AC010980.1-201ENST00000587192 1142 ntBASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC65Q8IXS2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC65Q8IXS2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.9■■□□□ 1.74
CCDC65Q8IXS2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC65Q8IXS2 PVT1_1.1-201ENST00000615125 194 ntBASIC25.9■■□□□ 1.74
CCDC65Q8IXS2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC65Q8IXS2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC65Q8IXS2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.89■■□□□ 1.74
CCDC65Q8IXS2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CCDC65Q8IXS2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.89■■□□□ 1.74
CCDC65Q8IXS2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CCDC65Q8IXS2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 AC093323.1-202ENST00000635031 2045 ntBASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC65Q8IXS2 HLA-L-211ENST00000482052 1765 ntBASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC65Q8IXS2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC65Q8IXS2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.85■■□□□ 1.73
CCDC65Q8IXS2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.85■■□□□ 1.73
CCDC65Q8IXS2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC65Q8IXS2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC65Q8IXS2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.85■■□□□ 1.73
CCDC65Q8IXS2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC65Q8IXS2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC65Q8IXS2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 LINC00543-201ENST00000567234 1845 ntBASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 AC011551.1-201ENST00000614101 683 ntBASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 AC141586.4-201ENST00000624558 1573 ntBASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC65Q8IXS2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC65Q8IXS2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CCDC65Q8IXS2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.82■■□□□ 1.72
CCDC65Q8IXS2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC65Q8IXS2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC65Q8IXS2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.82■■□□□ 1.72
CCDC65Q8IXS2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CCDC65Q8IXS2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC65Q8IXS2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.81■■□□□ 1.72
CCDC65Q8IXS2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.8■■□□□ 1.72
CCDC65Q8IXS2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms