Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pabpc5Q8C7D3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pabpc5Q8C7D3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pabpc5Q8C7D3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pabpc5Q8C7D3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pabpc5Q8C7D3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pabpc5Q8C7D3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pabpc5Q8C7D3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.01■□□□□ 0.95
Pabpc5Q8C7D3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pabpc5Q8C7D3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.01■□□□□ 0.95
Pabpc5Q8C7D3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pabpc5Q8C7D3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pabpc5Q8C7D3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pabpc5Q8C7D3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pabpc5Q8C7D3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pabpc5Q8C7D3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pabpc5Q8C7D3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.99■□□□□ 0.95
Pabpc5Q8C7D3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pabpc5Q8C7D3 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pabpc5Q8C7D3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pabpc5Q8C7D3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.95■□□□□ 0.94
Pabpc5Q8C7D3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pabpc5Q8C7D3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.93■□□□□ 0.94
Pabpc5Q8C7D3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pabpc5Q8C7D3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.93■□□□□ 0.94
Pabpc5Q8C7D3 Serp2-204ENSMUST00000228055 705 ntBASIC20.93■□□□□ 0.94
Pabpc5Q8C7D3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pabpc5Q8C7D3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pabpc5Q8C7D3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pabpc5Q8C7D3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpc5Q8C7D3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.91■□□□□ 0.94
Pabpc5Q8C7D3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.91■□□□□ 0.94
Pabpc5Q8C7D3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpc5Q8C7D3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.91■□□□□ 0.94
Pabpc5Q8C7D3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpc5Q8C7D3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpc5Q8C7D3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpc5Q8C7D3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpc5Q8C7D3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.9■□□□□ 0.94
Pabpc5Q8C7D3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpc5Q8C7D3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pabpc5Q8C7D3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Pabpc5Q8C7D3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpc5Q8C7D3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms