Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Usp47Q8BY87 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC30.15■■■□□ 2.42
Usp47Q8BY87 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Usp47Q8BY87 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Usp47Q8BY87 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Usp47Q8BY87 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Usp47Q8BY87 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
Usp47Q8BY87 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Usp47Q8BY87 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Usp47Q8BY87 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC30.12■■■□□ 2.41
Usp47Q8BY87 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Usp47Q8BY87 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Usp47Q8BY87 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Usp47Q8BY87 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Usp47Q8BY87 Gm42418-201ENSMUST00000182010 1831 ntBASIC30.12■■■□□ 2.41
Usp47Q8BY87 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Usp47Q8BY87 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC30.11■■■□□ 2.41
Usp47Q8BY87 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Usp47Q8BY87 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Usp47Q8BY87 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Usp47Q8BY87 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Usp47Q8BY87 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Usp47Q8BY87 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Usp47Q8BY87 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Usp47Q8BY87 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Usp47Q8BY87 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Usp47Q8BY87 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.41
Usp47Q8BY87 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Usp47Q8BY87 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Usp47Q8BY87 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Usp47Q8BY87 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC30.07■■■□□ 2.4
Usp47Q8BY87 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
Usp47Q8BY87 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Usp47Q8BY87 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Usp47Q8BY87 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Usp47Q8BY87 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Usp47Q8BY87 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Usp47Q8BY87 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Usp47Q8BY87 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Usp47Q8BY87 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Usp47Q8BY87 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Usp47Q8BY87 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Usp47Q8BY87 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Usp47Q8BY87 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Usp47Q8BY87 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Usp47Q8BY87 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Usp47Q8BY87 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Usp47Q8BY87 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC30.03■■■□□ 2.4
Usp47Q8BY87 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Usp47Q8BY87 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Usp47Q8BY87 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Usp47Q8BY87 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Usp47Q8BY87 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Usp47Q8BY87 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp47Q8BY87 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp47Q8BY87 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Usp47Q8BY87 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp47Q8BY87 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp47Q8BY87 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp47Q8BY87 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Usp47Q8BY87 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Usp47Q8BY87 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Usp47Q8BY87 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Usp47Q8BY87 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC30■■■□□ 2.39
Usp47Q8BY87 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Usp47Q8BY87 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Usp47Q8BY87 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Usp47Q8BY87 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Usp47Q8BY87 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Usp47Q8BY87 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Usp47Q8BY87 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Usp47Q8BY87 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Usp47Q8BY87 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC29.99■■■□□ 2.39
Usp47Q8BY87 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Usp47Q8BY87 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Usp47Q8BY87 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Usp47Q8BY87 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Usp47Q8BY87 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Usp47Q8BY87 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Usp47Q8BY87 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Usp47Q8BY87 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
Usp47Q8BY87 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Usp47Q8BY87 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC29.97■■■□□ 2.39
Usp47Q8BY87 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Usp47Q8BY87 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Usp47Q8BY87 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Usp47Q8BY87 Gm37415-201ENSMUST00000192265 2054 ntBASIC29.96■■■□□ 2.39
Usp47Q8BY87 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Usp47Q8BY87 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Usp47Q8BY87 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Usp47Q8BY87 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Usp47Q8BY87 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Usp47Q8BY87 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Usp47Q8BY87 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Usp47Q8BY87 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Usp47Q8BY87 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
Usp47Q8BY87 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Usp47Q8BY87 Kdm3b-204ENSMUST00000224715 2032 ntBASIC29.95■■■□□ 2.38
Usp47Q8BY87 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC29.94■■■□□ 2.38
Usp47Q8BY87 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC29.94■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 939.3 ms