Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf7Q8BTV2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf7Q8BTV2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf7Q8BTV2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf7Q8BTV2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cpsf7Q8BTV2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Scarna2-201ENSMUST00000157560 414 ntBASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Gm4430-201ENSMUST00000192413 1943 ntBASIC21■□□□□ 0.95
Cpsf7Q8BTV2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.99■□□□□ 0.95
Cpsf7Q8BTV2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf7Q8BTV2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf7Q8BTV2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cpsf7Q8BTV2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cpsf7Q8BTV2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf7Q8BTV2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf7Q8BTV2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.97■□□□□ 0.95
Cpsf7Q8BTV2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf7Q8BTV2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf7Q8BTV2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cpsf7Q8BTV2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.95■□□□□ 0.94
Cpsf7Q8BTV2 Gm9806-201ENSMUST00000051080 552 ntBASIC20.95■□□□□ 0.94
Cpsf7Q8BTV2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf7Q8BTV2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf7Q8BTV2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf7Q8BTV2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf7Q8BTV2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf7Q8BTV2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cpsf7Q8BTV2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf7Q8BTV2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf7Q8BTV2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf7Q8BTV2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf7Q8BTV2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.94■□□□□ 0.94
Cpsf7Q8BTV2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Gm11687-201ENSMUST00000118911 886 ntBASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf7Q8BTV2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Gm16437-201ENSMUST00000025669 507 ntBASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf7Q8BTV2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms