Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp8Q80U87 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp8Q80U87 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usp8Q80U87 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Usp8Q80U87 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp8Q80U87 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp8Q80U87 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.93■□□□□ 0.94
Usp8Q80U87 Gm12366-201ENSMUST00000121722 873 ntBASIC20.93■□□□□ 0.94
Usp8Q80U87 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp8Q80U87 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Usp8Q80U87 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.93■□□□□ 0.94
Usp8Q80U87 Gm5786-201ENSMUST00000085368 882 ntBASIC20.93■□□□□ 0.94
Usp8Q80U87 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp8Q80U87 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp8Q80U87 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.92■□□□□ 0.94
Usp8Q80U87 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.92■□□□□ 0.94
Usp8Q80U87 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp8Q80U87 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp8Q80U87 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp8Q80U87 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp8Q80U87 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp8Q80U87 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.91■□□□□ 0.94
Usp8Q80U87 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp8Q80U87 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp8Q80U87 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp8Q80U87 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp8Q80U87 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp8Q80U87 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.9■□□□□ 0.94
Usp8Q80U87 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp8Q80U87 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp8Q80U87 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp8Q80U87 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp8Q80U87 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp8Q80U87 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp8Q80U87 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp8Q80U87 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp8Q80U87 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp8Q80U87 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Usp8Q80U87 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp8Q80U87 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp8Q80U87 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.88■□□□□ 0.93
Usp8Q80U87 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp8Q80U87 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp8Q80U87 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp8Q80U87 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Usp8Q80U87 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp8Q80U87 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.87■□□□□ 0.93
Usp8Q80U87 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp8Q80U87 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp8Q80U87 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Usp8Q80U87 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.86■□□□□ 0.93
Usp8Q80U87 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.86■□□□□ 0.93
Usp8Q80U87 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp8Q80U87 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp8Q80U87 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.85■□□□□ 0.93
Usp8Q80U87 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp8Q80U87 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp8Q80U87 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp8Q80U87 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp8Q80U87 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp8Q80U87 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp8Q80U87 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp8Q80U87 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp8Q80U87 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Usp8Q80U87 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp8Q80U87 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Usp8Q80U87 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp8Q80U87 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.84■□□□□ 0.93
Usp8Q80U87 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp8Q80U87 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp8Q80U87 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp8Q80U87 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp8Q80U87 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp8Q80U87 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.83■□□□□ 0.93
Usp8Q80U87 Gm10420-201ENSMUST00000121713 882 ntBASIC20.83■□□□□ 0.93
Usp8Q80U87 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms