Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cnih3Q6ZWS4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cnih3Q6ZWS4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnih3Q6ZWS4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnih3Q6ZWS4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.33■□□□□ 0.68
Cnih3Q6ZWS4 Golph3-202ENSMUST00000226517 2359 ntBASIC19.33■□□□□ 0.68
Cnih3Q6ZWS4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnih3Q6ZWS4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnih3Q6ZWS4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Gm6821-201ENSMUST00000107540 542 ntBASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnih3Q6ZWS4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnih3Q6ZWS4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cnih3Q6ZWS4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnih3Q6ZWS4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cnih3Q6ZWS4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cnih3Q6ZWS4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cnih3Q6ZWS4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnih3Q6ZWS4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnih3Q6ZWS4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnih3Q6ZWS4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cnih3Q6ZWS4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnih3Q6ZWS4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cnih3Q6ZWS4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.27■□□□□ 0.68
Cnih3Q6ZWS4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cnih3Q6ZWS4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cnih3Q6ZWS4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.27■□□□□ 0.68
Cnih3Q6ZWS4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.27■□□□□ 0.68
Cnih3Q6ZWS4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Cnih3Q6ZWS4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnih3Q6ZWS4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnih3Q6ZWS4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnih3Q6ZWS4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnih3Q6ZWS4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cnih3Q6ZWS4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cnih3Q6ZWS4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cnih3Q6ZWS4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cnih3Q6ZWS4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cnih3Q6ZWS4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cnih3Q6ZWS4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms