Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.38■■□□□ 1.01
PTCHD4Q6ZW05 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PTCHD4Q6ZW05 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
PTCHD4Q6ZW05 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCHD4Q6ZW05 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTCHD4Q6ZW05 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.37■■□□□ 1.01
PTCHD4Q6ZW05 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.37■■□□□ 1.01
PTCHD4Q6ZW05 SMPD5-203ENST00000639008 1464 ntBASIC21.37■■□□□ 1.01
PTCHD4Q6ZW05 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCHD4Q6ZW05 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PTCHD4Q6ZW05 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 MIR3960-201ENST00000583311 91 ntBASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.35■■□□□ 1.01
PTCHD4Q6ZW05 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PTCHD4Q6ZW05 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCHD4Q6ZW05 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PTCHD4Q6ZW05 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTCHD4Q6ZW05 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTCHD4Q6ZW05 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTCHD4Q6ZW05 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PTCHD4Q6ZW05 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PTCHD4Q6ZW05 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PTCHD4Q6ZW05 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.33■■□□□ 1
PTCHD4Q6ZW05 ABCB10P4-201ENST00000566803 2184 ntBASIC21.33■■□□□ 1
PTCHD4Q6ZW05 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PTCHD4Q6ZW05 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.32■■□□□ 1
PTCHD4Q6ZW05 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PTCHD4Q6ZW05 AC079834.2-201ENST00000609776 1949 ntBASIC21.32■■□□□ 1
PTCHD4Q6ZW05 AC022413.1-201ENST00000624602 984 ntBASIC21.32■■□□□ 1
PTCHD4Q6ZW05 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTCHD4Q6ZW05 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.32■■□□□ 1
PTCHD4Q6ZW05 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PTCHD4Q6ZW05 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PTCHD4Q6ZW05 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.31■■□□□ 1
PTCHD4Q6ZW05 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTCHD4Q6ZW05 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PTCHD4Q6ZW05 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTCHD4Q6ZW05 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTCHD4Q6ZW05 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.3■■□□□ 1
PTCHD4Q6ZW05 ECEL1P2-201ENST00000461596 1295 ntBASIC21.3■■□□□ 1
PTCHD4Q6ZW05 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.3■■□□□ 1
PTCHD4Q6ZW05 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.3■■□□□ 1
PTCHD4Q6ZW05 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.29■■□□□ 1
PTCHD4Q6ZW05 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.28■■□□□ 1
PTCHD4Q6ZW05 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCHD4Q6ZW05 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PTCHD4Q6ZW05 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PTCHD4Q6ZW05 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PTCHD4Q6ZW05 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.27■■□□□ 1
PTCHD4Q6ZW05 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.27■■□□□ 1
PTCHD4Q6ZW05 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 MIR6089-201ENST00000616698 64 ntBASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCHD4Q6ZW05 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCHD4Q6ZW05 RP9P-202ENST00000450133 1212 ntBASIC21.25■□□□□ 0.99
PTCHD4Q6ZW05 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.25■□□□□ 0.99
PTCHD4Q6ZW05 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.25■□□□□ 0.99
PTCHD4Q6ZW05 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTCHD4Q6ZW05 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms