Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srsf1Q6PDM2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Srsf1Q6PDM2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srsf1Q6PDM2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.42■□□□□ 0.54
Srsf1Q6PDM2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Srsf1Q6PDM2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Gm9870-201ENSMUST00000063874 645 ntBASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srsf1Q6PDM2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Gm42642-201ENSMUST00000200683 355 ntBASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srsf1Q6PDM2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srsf1Q6PDM2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Srsf1Q6PDM2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Srsf1Q6PDM2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Srsf1Q6PDM2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.39■□□□□ 0.53
Srsf1Q6PDM2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Srsf1Q6PDM2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srsf1Q6PDM2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srsf1Q6PDM2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srsf1Q6PDM2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srsf1Q6PDM2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srsf1Q6PDM2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Srsf1Q6PDM2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Srsf1Q6PDM2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Srsf1Q6PDM2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srsf1Q6PDM2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srsf1Q6PDM2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srsf1Q6PDM2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srsf1Q6PDM2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Srsf1Q6PDM2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Srsf1Q6PDM2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Srsf1Q6PDM2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.33■□□□□ 0.52
Srsf1Q6PDM2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Srsf1Q6PDM2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srsf1Q6PDM2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.33■□□□□ 0.52
Srsf1Q6PDM2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srsf1Q6PDM2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Srsf1Q6PDM2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Srsf1Q6PDM2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Srsf1Q6PDM2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms