Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Knl1Q66JQ7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Knl1Q66JQ7 Gm10849-201ENSMUST00000100397 618 ntBASIC30.57■■■□□ 2.48
Knl1Q66JQ7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Knl1Q66JQ7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Knl1Q66JQ7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC30.56■■■□□ 2.48
Knl1Q66JQ7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Knl1Q66JQ7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.56■■■□□ 2.48
Knl1Q66JQ7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Knl1Q66JQ7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Knl1Q66JQ7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
Knl1Q66JQ7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Knl1Q66JQ7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Knl1Q66JQ7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Knl1Q66JQ7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Knl1Q66JQ7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC30.54■■■□□ 2.48
Knl1Q66JQ7 Gm8493-201ENSMUST00000196881 489 ntBASIC30.54■■■□□ 2.48
Knl1Q66JQ7 Wdr70-203ENSMUST00000227371 1130 ntBASIC30.54■■■□□ 2.48
Knl1Q66JQ7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Knl1Q66JQ7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Knl1Q66JQ7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Knl1Q66JQ7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC30.53■■■□□ 2.48
Knl1Q66JQ7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC30.53■■■□□ 2.48
Knl1Q66JQ7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC30.53■■■□□ 2.48
Knl1Q66JQ7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Knl1Q66JQ7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC30.53■■■□□ 2.48
Knl1Q66JQ7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
Knl1Q66JQ7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Knl1Q66JQ7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Knl1Q66JQ7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Knl1Q66JQ7 Spcs1-207ENSMUST00000228767 1008 ntBASIC30.52■■■□□ 2.48
Knl1Q66JQ7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Knl1Q66JQ7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Knl1Q66JQ7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Knl1Q66JQ7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Knl1Q66JQ7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Knl1Q66JQ7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Knl1Q66JQ7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC30.51■■■□□ 2.47
Knl1Q66JQ7 Gm6934-201ENSMUST00000194780 1905 ntBASIC30.51■■■□□ 2.47
Knl1Q66JQ7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Knl1Q66JQ7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC30.5■■■□□ 2.47
Knl1Q66JQ7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Knl1Q66JQ7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC30.5■■■□□ 2.47
Knl1Q66JQ7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Knl1Q66JQ7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Knl1Q66JQ7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC30.5■■■□□ 2.47
Knl1Q66JQ7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Knl1Q66JQ7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC30.49■■■□□ 2.47
Knl1Q66JQ7 Gm10657-201ENSMUST00000193528 1031 ntBASIC30.49■■■□□ 2.47
Knl1Q66JQ7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Knl1Q66JQ7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Knl1Q66JQ7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Knl1Q66JQ7 Gm8770-201ENSMUST00000121113 1109 ntBASIC30.48■■■□□ 2.47
Knl1Q66JQ7 Gm27011-201ENSMUST00000182352 972 ntBASIC30.48■■■□□ 2.47
Knl1Q66JQ7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC30.48■■■□□ 2.47
Knl1Q66JQ7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Knl1Q66JQ7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC30.48■■■□□ 2.47
Knl1Q66JQ7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Knl1Q66JQ7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Knl1Q66JQ7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC30.47■■■□□ 2.47
Knl1Q66JQ7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC30.47■■■□□ 2.47
Knl1Q66JQ7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Knl1Q66JQ7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC30.45■■■□□ 2.47
Knl1Q66JQ7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Knl1Q66JQ7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
Knl1Q66JQ7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Knl1Q66JQ7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Knl1Q66JQ7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC30.45■■■□□ 2.46
Knl1Q66JQ7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Knl1Q66JQ7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
Knl1Q66JQ7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Knl1Q66JQ7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Knl1Q66JQ7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Knl1Q66JQ7 Gm27405-201ENSMUST00000184201 112 ntBASIC30.44■■■□□ 2.46
Knl1Q66JQ7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Knl1Q66JQ7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC30.43■■■□□ 2.46
Knl1Q66JQ7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Knl1Q66JQ7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Knl1Q66JQ7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC30.42■■■□□ 2.46
Knl1Q66JQ7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Knl1Q66JQ7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Knl1Q66JQ7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Knl1Q66JQ7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Knl1Q66JQ7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Knl1Q66JQ7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Knl1Q66JQ7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Knl1Q66JQ7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Knl1Q66JQ7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Knl1Q66JQ7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Knl1Q66JQ7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Knl1Q66JQ7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Knl1Q66JQ7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms