Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1eQ61290 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1eQ61290 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1eQ61290 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.01■□□□□ 0.95
Cacna1eQ61290 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1eQ61290 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.01■□□□□ 0.95
Cacna1eQ61290 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1eQ61290 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21■□□□□ 0.95
Cacna1eQ61290 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21■□□□□ 0.95
Cacna1eQ61290 AC116713.1-201ENSMUST00000215074 430 ntBASIC21■□□□□ 0.95
Cacna1eQ61290 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1eQ61290 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1eQ61290 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.99■□□□□ 0.95
Cacna1eQ61290 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1eQ61290 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cacna1eQ61290 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.99■□□□□ 0.95
Cacna1eQ61290 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1eQ61290 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Cacna1eQ61290 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1eQ61290 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1eQ61290 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1eQ61290 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cacna1eQ61290 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1eQ61290 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1eQ61290 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1eQ61290 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1eQ61290 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cacna1eQ61290 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cacna1eQ61290 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1eQ61290 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1eQ61290 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1eQ61290 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1eQ61290 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cacna1eQ61290 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cacna1eQ61290 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1eQ61290 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Gm6139-201ENSMUST00000079261 882 ntBASIC20.94■□□□□ 0.94
Cacna1eQ61290 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1eQ61290 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1eQ61290 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1eQ61290 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1eQ61290 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.93■□□□□ 0.94
Cacna1eQ61290 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1eQ61290 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1eQ61290 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1eQ61290 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.92■□□□□ 0.94
Cacna1eQ61290 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cacna1eQ61290 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.92■□□□□ 0.94
Cacna1eQ61290 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1eQ61290 Gm43137-201ENSMUST00000198052 594 ntBASIC20.92■□□□□ 0.94
Cacna1eQ61290 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
Cacna1eQ61290 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cacna1eQ61290 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.91■□□□□ 0.94
Cacna1eQ61290 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cacna1eQ61290 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Cacna1eQ61290 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.89■□□□□ 0.94
Cacna1eQ61290 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cacna1eQ61290 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cacna1eQ61290 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacna1eQ61290 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Cacna1eQ61290 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacna1eQ61290 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.88■□□□□ 0.93
Cacna1eQ61290 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cacna1eQ61290 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms