Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.47■■□□□ 1.03
Fam196aQ3USH1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Fam196aQ3USH1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.47■■□□□ 1.03
Fam196aQ3USH1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam196aQ3USH1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam196aQ3USH1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam196aQ3USH1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Fam196aQ3USH1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fam196aQ3USH1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Fam196aQ3USH1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Fam196aQ3USH1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Gm42642-201ENSMUST00000200683 355 ntBASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Fam196aQ3USH1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Fam196aQ3USH1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam196aQ3USH1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Fam196aQ3USH1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam196aQ3USH1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Fam196aQ3USH1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Fam196aQ3USH1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam196aQ3USH1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.43■■□□□ 1.02
Fam196aQ3USH1 Gm10849-201ENSMUST00000100397 618 ntBASIC21.42■■□□□ 1.02
Fam196aQ3USH1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam196aQ3USH1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam196aQ3USH1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.42■■□□□ 1.02
Fam196aQ3USH1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam196aQ3USH1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fam196aQ3USH1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Fam196aQ3USH1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.41■■□□□ 1.02
Fam196aQ3USH1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam196aQ3USH1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam196aQ3USH1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam196aQ3USH1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam196aQ3USH1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fam196aQ3USH1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Fam196aQ3USH1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam196aQ3USH1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam196aQ3USH1 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.39■■□□□ 1.01
Fam196aQ3USH1 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.39■■□□□ 1.01
Fam196aQ3USH1 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.39■■□□□ 1.01
Fam196aQ3USH1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam196aQ3USH1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fam196aQ3USH1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam196aQ3USH1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam196aQ3USH1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam196aQ3USH1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fam196aQ3USH1 Gm26833-201ENSMUST00000180899 440 ntBASIC21.38■■□□□ 1.01
Fam196aQ3USH1 Gm43060-201ENSMUST00000200621 289 ntBASIC21.37■■□□□ 1.01
Fam196aQ3USH1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Fam196aQ3USH1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.37■■□□□ 1.01
Fam196aQ3USH1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Fam196aQ3USH1 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.36■■□□□ 1.01
Fam196aQ3USH1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Fam196aQ3USH1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam196aQ3USH1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fam196aQ3USH1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.35■■□□□ 1.01
Fam196aQ3USH1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fam196aQ3USH1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Fam196aQ3USH1 Gm12251-201ENSMUST00000117893 792 ntBASIC21.35■■□□□ 1.01
Fam196aQ3USH1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.35■■□□□ 1.01
Fam196aQ3USH1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.35■■□□□ 1.01
Fam196aQ3USH1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Fam196aQ3USH1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam196aQ3USH1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam196aQ3USH1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.34■■□□□ 1.01
Fam196aQ3USH1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam196aQ3USH1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fam196aQ3USH1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Fam196aQ3USH1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam196aQ3USH1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.33■■□□□ 1.01
Fam196aQ3USH1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam196aQ3USH1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fam196aQ3USH1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.32■■□□□ 1
Fam196aQ3USH1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam196aQ3USH1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam196aQ3USH1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.32■■□□□ 1
Fam196aQ3USH1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam196aQ3USH1 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.31■■□□□ 1
Fam196aQ3USH1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam196aQ3USH1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Fam196aQ3USH1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms