Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC42.06■■■■■ 4.32
HMGXB3Q12766 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC42.06■■■■■ 4.32
HMGXB3Q12766 RARRES2P11-201ENST00000635158 484 ntBASIC42.05■■■■■ 4.32
HMGXB3Q12766 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC42.05■■■■■ 4.32
HMGXB3Q12766 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC42.04■■■■■ 4.32
HMGXB3Q12766 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC42.04■■■■■ 4.32
HMGXB3Q12766 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC42.04■■■■■ 4.32
HMGXB3Q12766 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC42.03■■■■■ 4.32
HMGXB3Q12766 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC42.03■■■■■ 4.32
HMGXB3Q12766 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC42.02■■■■■ 4.32
HMGXB3Q12766 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC42.02■■■■■ 4.32
HMGXB3Q12766 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC42.01■■■■■ 4.32
HMGXB3Q12766 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC42.01■■■■■ 4.32
HMGXB3Q12766 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC42■■■■■ 4.31
HMGXB3Q12766 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC42■■■■■ 4.31
HMGXB3Q12766 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC42■■■■■ 4.31
HMGXB3Q12766 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC42■■■■■ 4.31
HMGXB3Q12766 LBH-205ENST00000407930 756 ntTSL 2 BASIC42■■■■■ 4.31
HMGXB3Q12766 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC42■■■■■ 4.31
HMGXB3Q12766 AC004448.1-201ENST00000458332 883 ntBASIC42■■■■■ 4.31
HMGXB3Q12766 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC41.99■■■■■ 4.31
HMGXB3Q12766 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC41.99■■■■■ 4.31
HMGXB3Q12766 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC41.99■■■■■ 4.31
HMGXB3Q12766 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC41.98■■■■■ 4.31
HMGXB3Q12766 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC41.98■■■■■ 4.31
HMGXB3Q12766 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC41.98■■■■■ 4.31
HMGXB3Q12766 AC090877.2-201ENST00000558441 1738 ntBASIC41.97■■■■■ 4.31
HMGXB3Q12766 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
HMGXB3Q12766 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC41.96■■■■■ 4.31
HMGXB3Q12766 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
HMGXB3Q12766 AC011298.3-201ENST00000615796 283 ntBASIC41.96■■■■■ 4.31
HMGXB3Q12766 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC41.96■■■■■ 4.31
HMGXB3Q12766 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC41.95■■■■■ 4.31
HMGXB3Q12766 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC41.95■■■■■ 4.31
HMGXB3Q12766 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC41.95■■■■■ 4.31
HMGXB3Q12766 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC41.95■■■■■ 4.31
HMGXB3Q12766 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
HMGXB3Q12766 SERBP1P1-201ENST00000396021 1160 ntBASIC41.94■■■■■ 4.3
HMGXB3Q12766 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC41.94■■■■■ 4.3
HMGXB3Q12766 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC41.94■■■■■ 4.3
HMGXB3Q12766 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
HMGXB3Q12766 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC41.93■■■■■ 4.3
HMGXB3Q12766 PTCHD3P2-201ENST00000424937 1205 ntBASIC41.93■■■■■ 4.3
HMGXB3Q12766 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
HMGXB3Q12766 AP004609.3-201ENST00000610705 1884 ntBASIC41.92■■■■■ 4.3
HMGXB3Q12766 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC41.92■■■■■ 4.3
HMGXB3Q12766 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC41.92■■■■■ 4.3
HMGXB3Q12766 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC41.92■■■■■ 4.3
HMGXB3Q12766 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC41.91■■■■■ 4.3
HMGXB3Q12766 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC41.91■■■■■ 4.3
HMGXB3Q12766 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
HMGXB3Q12766 JTB-203ENST00000368589 1216 ntTSL 2 BASIC41.9■■■■■ 4.3
HMGXB3Q12766 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
HMGXB3Q12766 SYT6-210ENST00000641643 1587 ntBASIC41.89■■■■■ 4.3
HMGXB3Q12766 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC41.89■■■■■ 4.3
HMGXB3Q12766 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC41.89■■■■■ 4.3
HMGXB3Q12766 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC41.89■■■■■ 4.3
HMGXB3Q12766 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC41.89■■■■■ 4.3
HMGXB3Q12766 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC41.89■■■■■ 4.3
HMGXB3Q12766 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC41.88■■■■■ 4.3
HMGXB3Q12766 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC41.88■■■■■ 4.29
HMGXB3Q12766 RHOF-204ENST00000537265 699 ntTSL 2 BASIC41.88■■■■■ 4.29
HMGXB3Q12766 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC41.86■■■■■ 4.29
HMGXB3Q12766 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC41.86■■■■■ 4.29
HMGXB3Q12766 AC092171.4-201ENST00000609130 632 ntBASIC41.86■■■■■ 4.29
HMGXB3Q12766 IKBKGP1-201ENST00000612193 1073 ntBASIC41.86■■■■■ 4.29
HMGXB3Q12766 ABCB10P1-201ENST00000614297 2181 ntBASIC41.86■■■■■ 4.29
HMGXB3Q12766 IRS3P-201ENST00000223076 1006 ntBASIC41.85■■■■■ 4.29
HMGXB3Q12766 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC41.85■■■■■ 4.29
HMGXB3Q12766 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC41.85■■■■■ 4.29
HMGXB3Q12766 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC41.85■■■■■ 4.29
HMGXB3Q12766 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC41.85■■■■■ 4.29
HMGXB3Q12766 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC41.85■■■■■ 4.29
HMGXB3Q12766 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC41.85■■■■■ 4.29
HMGXB3Q12766 AL138724.1-201ENST00000606771 1088 ntBASIC41.85■■■■■ 4.29
HMGXB3Q12766 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC41.84■■■■■ 4.29
HMGXB3Q12766 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC41.84■■■■■ 4.29
HMGXB3Q12766 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC41.84■■■■■ 4.29
HMGXB3Q12766 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC41.84■■■■■ 4.29
HMGXB3Q12766 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
HMGXB3Q12766 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC41.83■■■■■ 4.29
HMGXB3Q12766 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC41.83■■■■■ 4.29
HMGXB3Q12766 AC092437.1-201ENST00000624794 1048 ntBASIC41.83■■■■■ 4.29
HMGXB3Q12766 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC41.83■■■■■ 4.29
HMGXB3Q12766 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC41.82■■■■■ 4.29
HMGXB3Q12766 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC41.82■■■■■ 4.29
HMGXB3Q12766 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC41.82■■■■■ 4.29
HMGXB3Q12766 HACD1-201ENST00000326961 773 ntTSL 2 BASIC41.81■■■■■ 4.28
HMGXB3Q12766 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC41.81■■■■■ 4.28
HMGXB3Q12766 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC41.81■■■■■ 4.28
HMGXB3Q12766 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC41.81■■■■■ 4.28
HMGXB3Q12766 AC099791.1-201ENST00000416440 715 ntBASIC41.8■■■■■ 4.28
HMGXB3Q12766 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC41.79■■■■■ 4.28
HMGXB3Q12766 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC41.79■■■■■ 4.28
HMGXB3Q12766 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC41.79■■■■■ 4.28
HMGXB3Q12766 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC41.79■■■■■ 4.28
HMGXB3Q12766 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC41.79■■■■■ 4.28
HMGXB3Q12766 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC41.79■■■■■ 4.28
HMGXB3Q12766 KRT18P5-201ENST00000436075 1291 ntBASIC41.78■■■■■ 4.28
HMGXB3Q12766 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC41.77■■■■■ 4.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms