Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
HMGCS2P54868 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCS2P54868 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCS2P54868 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
HMGCS2P54868 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.26■■□□□ 1.95
HMGCS2P54868 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.26■■□□□ 1.95
HMGCS2P54868 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HMGCS2P54868 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HMGCS2P54868 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.26■■□□□ 1.95
HMGCS2P54868 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
HMGCS2P54868 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HMGCS2P54868 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.26■■□□□ 1.95
HMGCS2P54868 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCS2P54868 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
HMGCS2P54868 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCS2P54868 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCS2P54868 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCS2P54868 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.25■■□□□ 1.95
HMGCS2P54868 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.25■■□□□ 1.95
HMGCS2P54868 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCS2P54868 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCS2P54868 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
HMGCS2P54868 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.24■■□□□ 1.95
HMGCS2P54868 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.24■■□□□ 1.95
HMGCS2P54868 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HMGCS2P54868 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
HMGCS2P54868 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HMGCS2P54868 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.23■■□□□ 1.95
HMGCS2P54868 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCS2P54868 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCS2P54868 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
HMGCS2P54868 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCS2P54868 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.23■■□□□ 1.95
HMGCS2P54868 PBX2P1-201ENST00000493219 1291 ntBASIC27.23■■□□□ 1.95
HMGCS2P54868 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
HMGCS2P54868 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
HMGCS2P54868 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
HMGCS2P54868 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.22■■□□□ 1.95
HMGCS2P54868 AC106739.1-201ENST00000617035 715 ntBASIC27.22■■□□□ 1.95
HMGCS2P54868 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.22■■□□□ 1.95
HMGCS2P54868 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
HMGCS2P54868 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
HMGCS2P54868 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
HMGCS2P54868 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.21■■□□□ 1.95
HMGCS2P54868 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
HMGCS2P54868 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
HMGCS2P54868 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
HMGCS2P54868 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HMGCS2P54868 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HMGCS2P54868 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCS2P54868 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCS2P54868 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCS2P54868 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.19■■□□□ 1.94
HMGCS2P54868 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.19■■□□□ 1.94
HMGCS2P54868 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
HMGCS2P54868 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.19■■□□□ 1.94
HMGCS2P54868 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
HMGCS2P54868 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.18■■□□□ 1.94
HMGCS2P54868 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HMGCS2P54868 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HMGCS2P54868 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HMGCS2P54868 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
HMGCS2P54868 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
HMGCS2P54868 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
HMGCS2P54868 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HMGCS2P54868 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.18■■□□□ 1.94
HMGCS2P54868 UNC93B3-201ENST00000308076 687 ntBASIC27.17■■□□□ 1.94
HMGCS2P54868 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.17■■□□□ 1.94
HMGCS2P54868 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
HMGCS2P54868 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.17■■□□□ 1.94
HMGCS2P54868 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
HMGCS2P54868 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
HMGCS2P54868 GUK1-205ENST00000366722 850 ntTSL 3 BASIC27.16■■□□□ 1.94
HMGCS2P54868 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.16■■□□□ 1.94
HMGCS2P54868 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
HMGCS2P54868 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.16■■□□□ 1.94
HMGCS2P54868 AC010501.1-201ENST00000606270 1962 ntBASIC27.16■■□□□ 1.94
HMGCS2P54868 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
HMGCS2P54868 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HMGCS2P54868 ZNRF2P3-201ENST00000424200 374 ntBASIC27.15■■□□□ 1.94
HMGCS2P54868 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
HMGCS2P54868 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HMGCS2P54868 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.14■■□□□ 1.94
HMGCS2P54868 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
HMGCS2P54868 AC142381.2-201ENST00000566120 298 ntBASIC27.14■■□□□ 1.94
HMGCS2P54868 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.13■■□□□ 1.93
HMGCS2P54868 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.13■■□□□ 1.93
HMGCS2P54868 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.13■■□□□ 1.93
HMGCS2P54868 AL136162.1-201ENST00000607711 1078 ntBASIC27.13■■□□□ 1.93
HMGCS2P54868 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HMGCS2P54868 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
HMGCS2P54868 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
HMGCS2P54868 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.12■■□□□ 1.93
HMGCS2P54868 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
HMGCS2P54868 SRD5A1P1-201ENST00000442297 786 ntBASIC27.12■■□□□ 1.93
HMGCS2P54868 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.12■■□□□ 1.93
HMGCS2P54868 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HMGCS2P54868 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
HMGCS2P54868 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
HMGCS2P54868 AL031432.3-201ENST00000607698 485 ntBASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms