Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.87■□□□□ 0.93
Krt6aP50446 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Krt6aP50446 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt6aP50446 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt6aP50446 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt6aP50446 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Krt6aP50446 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt6aP50446 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt6aP50446 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt6aP50446 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Krt6aP50446 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Krt6aP50446 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.85■□□□□ 0.93
Krt6aP50446 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt6aP50446 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt6aP50446 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Krt6aP50446 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt6aP50446 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Krt6aP50446 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt6aP50446 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt6aP50446 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt6aP50446 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.84■□□□□ 0.93
Krt6aP50446 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt6aP50446 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt6aP50446 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt6aP50446 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Krt6aP50446 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Krt6aP50446 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt6aP50446 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.83■□□□□ 0.92
Krt6aP50446 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.83■□□□□ 0.92
Krt6aP50446 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.82■□□□□ 0.92
Krt6aP50446 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Krt6aP50446 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt6aP50446 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt6aP50446 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.82■□□□□ 0.92
Krt6aP50446 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt6aP50446 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt6aP50446 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Krt6aP50446 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt6aP50446 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.81■□□□□ 0.92
Krt6aP50446 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt6aP50446 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt6aP50446 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt6aP50446 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Krt6aP50446 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.81■□□□□ 0.92
Krt6aP50446 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Krt6aP50446 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt6aP50446 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt6aP50446 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Krt6aP50446 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt6aP50446 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Krt6aP50446 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt6aP50446 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt6aP50446 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt6aP50446 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt6aP50446 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt6aP50446 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt6aP50446 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Krt6aP50446 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Krt6aP50446 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Krt6aP50446 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Krt6aP50446 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Krt6aP50446 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt6aP50446 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.76■□□□□ 0.91
Krt6aP50446 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt6aP50446 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt6aP50446 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt6aP50446 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Krt6aP50446 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt6aP50446 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.75■□□□□ 0.91
Krt6aP50446 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.75■□□□□ 0.91
Krt6aP50446 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt6aP50446 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt6aP50446 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Krt6aP50446 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt6aP50446 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt6aP50446 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.74■□□□□ 0.91
Krt6aP50446 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt6aP50446 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt6aP50446 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt6aP50446 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Krt6aP50446 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt6aP50446 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Krt6aP50446 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Krt6aP50446 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.73■□□□□ 0.91
Krt6aP50446 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt6aP50446 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms