Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Fen1P39749 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fen1P39749 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fen1P39749 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.98■□□□□ 0.95
Fen1P39749 Gm44428-201ENSMUST00000204474 874 ntBASIC20.98■□□□□ 0.95
Fen1P39749 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.98■□□□□ 0.95
Fen1P39749 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Fen1P39749 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fen1P39749 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fen1P39749 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fen1P39749 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fen1P39749 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fen1P39749 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Fen1P39749 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fen1P39749 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Fen1P39749 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.97■□□□□ 0.95
Fen1P39749 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fen1P39749 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Fen1P39749 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fen1P39749 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fen1P39749 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fen1P39749 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Fen1P39749 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Fen1P39749 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fen1P39749 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fen1P39749 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fen1P39749 Gm11175-201ENSMUST00000116172 543 ntBASIC20.95■□□□□ 0.94
Fen1P39749 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fen1P39749 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fen1P39749 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.95■□□□□ 0.94
Fen1P39749 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fen1P39749 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fen1P39749 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.94■□□□□ 0.94
Fen1P39749 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fen1P39749 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.94■□□□□ 0.94
Fen1P39749 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.94■□□□□ 0.94
Fen1P39749 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fen1P39749 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
Fen1P39749 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.94■□□□□ 0.94
Fen1P39749 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fen1P39749 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fen1P39749 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fen1P39749 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Fen1P39749 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fen1P39749 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fen1P39749 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.92■□□□□ 0.94
Fen1P39749 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fen1P39749 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Fen1P39749 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Fen1P39749 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.92■□□□□ 0.94
Fen1P39749 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Fen1P39749 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fen1P39749 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Fen1P39749 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fen1P39749 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fen1P39749 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.91■□□□□ 0.94
Fen1P39749 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Fen1P39749 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fen1P39749 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fen1P39749 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Fen1P39749 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fen1P39749 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Fen1P39749 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fen1P39749 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.9■□□□□ 0.94
Fen1P39749 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.9■□□□□ 0.94
Fen1P39749 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fen1P39749 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fen1P39749 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fen1P39749 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fen1P39749 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Fen1P39749 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fen1P39749 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fen1P39749 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fen1P39749 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fen1P39749 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Fen1P39749 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fen1P39749 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.88■□□□□ 0.93
Fen1P39749 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.88■□□□□ 0.93
Fen1P39749 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.88■□□□□ 0.93
Fen1P39749 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.88■□□□□ 0.93
Fen1P39749 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.88■□□□□ 0.93
Fen1P39749 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Fen1P39749 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Fen1P39749 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fen1P39749 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fen1P39749 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fen1P39749 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fen1P39749 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Fen1P39749 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fen1P39749 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fen1P39749 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Fen1P39749 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms