Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1aP25118 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1aP25118 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.59■□□□□ 0.41
Tnfrsf1aP25118 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1aP25118 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Tnfrsf1aP25118 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.58■□□□□ 0.41
Tnfrsf1aP25118 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf1aP25118 Gm10420-201ENSMUST00000121713 882 ntBASIC17.58■□□□□ 0.4
Tnfrsf1aP25118 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.58■□□□□ 0.4
Tnfrsf1aP25118 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1aP25118 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1aP25118 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Tnfrsf1aP25118 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1aP25118 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1aP25118 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1aP25118 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1aP25118 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tnfrsf1aP25118 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1aP25118 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf1aP25118 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Cap2-205ENSMUST00000225824 1634 ntBASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf1aP25118 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf1aP25118 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf1aP25118 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf1aP25118 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf1aP25118 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
Tnfrsf1aP25118 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf1aP25118 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tnfrsf1aP25118 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1aP25118 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf1aP25118 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf1aP25118 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.51■□□□□ 0.39
Tnfrsf1aP25118 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1aP25118 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf1aP25118 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf1aP25118 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf1aP25118 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Tnfrsf1aP25118 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1aP25118 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1aP25118 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf1aP25118 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1aP25118 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Tnfrsf1aP25118 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1aP25118 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf1aP25118 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1aP25118 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1aP25118 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1aP25118 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Tnfrsf1aP25118 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tnfrsf1aP25118 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf1aP25118 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms