Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
MMP8P22894 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
MMP8P22894 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
MMP8P22894 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
MMP8P22894 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.67■■□□□ 1.54
MMP8P22894 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
MMP8P22894 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.67■■□□□ 1.54
MMP8P22894 AC012354.3-201ENST00000623734 483 ntBASIC24.67■■□□□ 1.54
MMP8P22894 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
MMP8P22894 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.67■■□□□ 1.54
MMP8P22894 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.67■■□□□ 1.54
MMP8P22894 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
MMP8P22894 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
MMP8P22894 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
MMP8P22894 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
MMP8P22894 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
MMP8P22894 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.66■■□□□ 1.54
MMP8P22894 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MMP8P22894 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
MMP8P22894 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.65■■□□□ 1.54
MMP8P22894 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
MMP8P22894 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
MMP8P22894 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.65■■□□□ 1.54
MMP8P22894 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
MMP8P22894 AC141586.4-201ENST00000624558 1573 ntBASIC24.64■■□□□ 1.54
MMP8P22894 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
MMP8P22894 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.64■■□□□ 1.53
MMP8P22894 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
MMP8P22894 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.63■■□□□ 1.53
MMP8P22894 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.63■■□□□ 1.53
MMP8P22894 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.63■■□□□ 1.53
MMP8P22894 AC074183.2-201ENST00000623112 922 ntBASIC24.63■■□□□ 1.53
MMP8P22894 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MMP8P22894 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MMP8P22894 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MMP8P22894 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
MMP8P22894 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.62■■□□□ 1.53
MMP8P22894 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MMP8P22894 BHLHE23-202ENST00000612929 1109 ntBASIC24.62■■□□□ 1.53
MMP8P22894 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MMP8P22894 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MMP8P22894 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
MMP8P22894 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.61■■□□□ 1.53
MMP8P22894 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MMP8P22894 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MMP8P22894 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.61■■□□□ 1.53
MMP8P22894 PVT1_1.1-201ENST00000615125 194 ntBASIC24.61■■□□□ 1.53
MMP8P22894 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MMP8P22894 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
MMP8P22894 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MMP8P22894 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MMP8P22894 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
MMP8P22894 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MMP8P22894 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.6■■□□□ 1.53
MMP8P22894 AC022616.5-201ENST00000518796 181 ntBASIC24.6■■□□□ 1.53
MMP8P22894 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
MMP8P22894 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MMP8P22894 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
MMP8P22894 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.59■■□□□ 1.53
MMP8P22894 AL033527.3-201ENST00000566366 1196 ntBASIC24.59■■□□□ 1.53
MMP8P22894 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
MMP8P22894 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.59■■□□□ 1.53
MMP8P22894 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
MMP8P22894 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MMP8P22894 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
MMP8P22894 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.58■■□□□ 1.53
MMP8P22894 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.58■■□□□ 1.53
MMP8P22894 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.58■■□□□ 1.53
MMP8P22894 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
MMP8P22894 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MMP8P22894 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
MMP8P22894 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.57■■□□□ 1.52
MMP8P22894 AC010980.1-201ENST00000587192 1142 ntBASIC24.57■■□□□ 1.52
MMP8P22894 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.57■■□□□ 1.52
MMP8P22894 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MMP8P22894 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MMP8P22894 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MMP8P22894 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP8P22894 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP8P22894 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.56■■□□□ 1.52
MMP8P22894 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.56■■□□□ 1.52
MMP8P22894 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MMP8P22894 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP8P22894 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP8P22894 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MMP8P22894 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
MMP8P22894 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.55■■□□□ 1.52
MMP8P22894 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.55■■□□□ 1.52
MMP8P22894 AC011551.1-201ENST00000614101 683 ntBASIC24.55■■□□□ 1.52
MMP8P22894 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MMP8P22894 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.54■■□□□ 1.52
MMP8P22894 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
MMP8P22894 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms