Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PSMC3P17980 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PSMC3P17980 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PSMC3P17980 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PSMC3P17980 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.36■■□□□ 1.49
PSMC3P17980 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.35■■□□□ 1.49
PSMC3P17980 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PSMC3P17980 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.35■■□□□ 1.49
PSMC3P17980 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PSMC3P17980 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PSMC3P17980 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.35■■□□□ 1.49
PSMC3P17980 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PSMC3P17980 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PSMC3P17980 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PSMC3P17980 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PSMC3P17980 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.34■■□□□ 1.49
PSMC3P17980 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PSMC3P17980 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PSMC3P17980 AC096631.2-201ENST00000436136 790 ntBASIC24.34■■□□□ 1.49
PSMC3P17980 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PSMC3P17980 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.33■■□□□ 1.49
PSMC3P17980 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PSMC3P17980 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.33■■□□□ 1.49
PSMC3P17980 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PSMC3P17980 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.33■■□□□ 1.49
PSMC3P17980 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.33■■□□□ 1.49
PSMC3P17980 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PSMC3P17980 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PSMC3P17980 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PSMC3P17980 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.32■■□□□ 1.48
PSMC3P17980 AL512631.2-201ENST00000604634 923 ntBASIC24.32■■□□□ 1.48
PSMC3P17980 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PSMC3P17980 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.32■■□□□ 1.48
PSMC3P17980 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PSMC3P17980 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PSMC3P17980 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.31■■□□□ 1.48
PSMC3P17980 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.31■■□□□ 1.48
PSMC3P17980 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PSMC3P17980 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PSMC3P17980 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PSMC3P17980 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.3■■□□□ 1.48
PSMC3P17980 AC005837.3-201ENST00000612163 286 ntBASIC24.3■■□□□ 1.48
PSMC3P17980 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PSMC3P17980 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PSMC3P17980 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.29■■□□□ 1.48
PSMC3P17980 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PSMC3P17980 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.29■■□□□ 1.48
PSMC3P17980 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.29■■□□□ 1.48
PSMC3P17980 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.29■■□□□ 1.48
PSMC3P17980 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.29■■□□□ 1.48
PSMC3P17980 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.29■■□□□ 1.48
PSMC3P17980 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PSMC3P17980 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PSMC3P17980 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PSMC3P17980 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PSMC3P17980 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PSMC3P17980 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.28■■□□□ 1.48
PSMC3P17980 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PSMC3P17980 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PSMC3P17980 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PSMC3P17980 AC133561.4-201ENST00000566112 224 ntBASIC24.27■■□□□ 1.48
PSMC3P17980 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.27■■□□□ 1.48
PSMC3P17980 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.27■■□□□ 1.48
PSMC3P17980 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PSMC3P17980 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PSMC3P17980 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PSMC3P17980 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PSMC3P17980 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PSMC3P17980 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PSMC3P17980 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.26■■□□□ 1.47
PSMC3P17980 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PSMC3P17980 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PSMC3P17980 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PSMC3P17980 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PSMC3P17980 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PSMC3P17980 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.25■■□□□ 1.47
PSMC3P17980 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.25■■□□□ 1.47
PSMC3P17980 AC090877.2-201ENST00000558441 1738 ntBASIC24.24■■□□□ 1.47
PSMC3P17980 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PSMC3P17980 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PSMC3P17980 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PSMC3P17980 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PSMC3P17980 SNX5-217ENST00000606557 1087 ntBASIC24.23■■□□□ 1.47
PSMC3P17980 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.23■■□□□ 1.47
PSMC3P17980 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PSMC3P17980 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PSMC3P17980 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PSMC3P17980 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
PSMC3P17980 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PSMC3P17980 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PSMC3P17980 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PSMC3P17980 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PSMC3P17980 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PSMC3P17980 MIR6722-201ENST00000617286 78 ntBASIC24.22■■□□□ 1.47
PSMC3P17980 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.22■■□□□ 1.47
PSMC3P17980 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PSMC3P17980 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.21■■□□□ 1.47
PSMC3P17980 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PSMC3P17980 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.21■■□□□ 1.47
PSMC3P17980 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms