Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ccl3P10855 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ccl3P10855 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccl3P10855 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl3P10855 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl3P10855 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.77■□□□□ 0.59
Ccl3P10855 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccl3P10855 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ccl3P10855 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.76■□□□□ 0.59
Ccl3P10855 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccl3P10855 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl3P10855 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl3P10855 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl3P10855 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccl3P10855 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Ccl3P10855 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccl3P10855 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccl3P10855 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccl3P10855 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Gm6139-201ENSMUST00000079261 882 ntBASIC18.74■□□□□ 0.59
Ccl3P10855 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Ccl3P10855 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.73■□□□□ 0.59
Ccl3P10855 Gm43137-201ENSMUST00000198052 594 ntBASIC18.73■□□□□ 0.59
Ccl3P10855 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccl3P10855 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccl3P10855 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.72■□□□□ 0.59
Ccl3P10855 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccl3P10855 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccl3P10855 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.72■□□□□ 0.59
Ccl3P10855 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccl3P10855 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Ccl3P10855 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ccl3P10855 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccl3P10855 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccl3P10855 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.71■□□□□ 0.59
Ccl3P10855 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccl3P10855 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccl3P10855 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Gm8495-201ENSMUST00000188740 694 ntBASIC18.7■□□□□ 0.58
Ccl3P10855 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccl3P10855 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccl3P10855 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.69■□□□□ 0.58
Ccl3P10855 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl3P10855 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.68■□□□□ 0.58
Ccl3P10855 Gm18284-201ENSMUST00000172604 624 ntBASIC18.68■□□□□ 0.58
Ccl3P10855 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccl3P10855 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl3P10855 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms