Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ccl3P10855 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ccl3P10855 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccl3P10855 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccl3P10855 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl3P10855 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccl3P10855 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.77■□□□□ 0.59
Ccl3P10855 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccl3P10855 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ccl3P10855 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.76■□□□□ 0.59
Ccl3P10855 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccl3P10855 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl3P10855 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl3P10855 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccl3P10855 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccl3P10855 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccl3P10855 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Ccl3P10855 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccl3P10855 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccl3P10855 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccl3P10855 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Gm6139-201ENSMUST00000079261 882 ntBASIC18.74■□□□□ 0.59
Ccl3P10855 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccl3P10855 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Ccl3P10855 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.73■□□□□ 0.59
Ccl3P10855 Gm43137-201ENSMUST00000198052 594 ntBASIC18.73■□□□□ 0.59
Ccl3P10855 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccl3P10855 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccl3P10855 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccl3P10855 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.72■□□□□ 0.59
Ccl3P10855 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccl3P10855 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccl3P10855 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.72■□□□□ 0.59
Ccl3P10855 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccl3P10855 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccl3P10855 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Ccl3P10855 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ccl3P10855 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccl3P10855 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccl3P10855 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.71■□□□□ 0.59
Ccl3P10855 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccl3P10855 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccl3P10855 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccl3P10855 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccl3P10855 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Gm8495-201ENSMUST00000188740 694 ntBASIC18.7■□□□□ 0.58
Ccl3P10855 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccl3P10855 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccl3P10855 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccl3P10855 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccl3P10855 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.69■□□□□ 0.58
Ccl3P10855 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl3P10855 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.68■□□□□ 0.58
Ccl3P10855 Gm18284-201ENSMUST00000172604 624 ntBASIC18.68■□□□□ 0.58
Ccl3P10855 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccl3P10855 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl3P10855 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms