Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.38■□□□□ 0.69
Tuba1bP05213 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tuba1bP05213 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tuba1bP05213 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tuba1bP05213 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tuba1bP05213 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tuba1bP05213 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tuba1bP05213 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.37■□□□□ 0.69
Tuba1bP05213 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tuba1bP05213 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tuba1bP05213 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.37■□□□□ 0.69
Tuba1bP05213 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tuba1bP05213 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tuba1bP05213 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tuba1bP05213 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tuba1bP05213 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tuba1bP05213 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tuba1bP05213 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.35■□□□□ 0.69
Tuba1bP05213 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tuba1bP05213 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tuba1bP05213 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tuba1bP05213 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.34■□□□□ 0.69
Tuba1bP05213 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tuba1bP05213 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.34■□□□□ 0.69
Tuba1bP05213 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.34■□□□□ 0.69
Tuba1bP05213 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tuba1bP05213 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tuba1bP05213 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tuba1bP05213 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.33■□□□□ 0.68
Tuba1bP05213 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tuba1bP05213 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tuba1bP05213 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Tuba1bP05213 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tuba1bP05213 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tuba1bP05213 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Tuba1bP05213 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tuba1bP05213 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tuba1bP05213 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tuba1bP05213 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tuba1bP05213 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.31■□□□□ 0.68
Tuba1bP05213 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tuba1bP05213 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tuba1bP05213 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tuba1bP05213 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tuba1bP05213 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tuba1bP05213 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tuba1bP05213 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tuba1bP05213 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Tuba1bP05213 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tuba1bP05213 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tuba1bP05213 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tuba1bP05213 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tuba1bP05213 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tuba1bP05213 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.3■□□□□ 0.68
Tuba1bP05213 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tuba1bP05213 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tuba1bP05213 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tuba1bP05213 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Tuba1bP05213 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.29■□□□□ 0.68
Tuba1bP05213 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tuba1bP05213 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Tuba1bP05213 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tuba1bP05213 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.28■□□□□ 0.68
Tuba1bP05213 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tuba1bP05213 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tuba1bP05213 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.28■□□□□ 0.68
Tuba1bP05213 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.28■□□□□ 0.68
Tuba1bP05213 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tuba1bP05213 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tuba1bP05213 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tuba1bP05213 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tuba1bP05213 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.27■□□□□ 0.68
Tuba1bP05213 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tuba1bP05213 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Tuba1bP05213 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.27■□□□□ 0.68
Tuba1bP05213 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tuba1bP05213 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tuba1bP05213 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tuba1bP05213 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tuba1bP05213 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tuba1bP05213 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tuba1bP05213 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tuba1bP05213 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tuba1bP05213 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms