Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFSF13O75888 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF13O75888 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFSF13O75888 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF13O75888 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF13O75888 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF13O75888 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF13O75888 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF13O75888 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF13O75888 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF13O75888 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF13O75888 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TNFSF13O75888 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TNFSF13O75888 AC145676.1-201ENST00000514988 2004 ntBASIC20.65■□□□□ 0.9
TNFSF13O75888 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.65■□□□□ 0.9
TNFSF13O75888 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF13O75888 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
TNFSF13O75888 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF13O75888 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.64■□□□□ 0.89
TNFSF13O75888 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.64■□□□□ 0.89
TNFSF13O75888 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF13O75888 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.64■□□□□ 0.89
TNFSF13O75888 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TNFSF13O75888 SLC6A10P-202ENST00000431994 2058 ntBASIC20.63■□□□□ 0.89
TNFSF13O75888 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF13O75888 AC008406.3-201ENST00000620001 1374 ntBASIC20.63■□□□□ 0.89
TNFSF13O75888 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF13O75888 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF13O75888 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.63■□□□□ 0.89
TNFSF13O75888 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF13O75888 MIR6724-1-201ENST00000616420 92 ntBASIC20.63■□□□□ 0.89
TNFSF13O75888 MIR6724-2-201ENST00000616483 92 ntBASIC20.63■□□□□ 0.89
TNFSF13O75888 MIR6724-4-201ENST00000617390 92 ntBASIC20.63■□□□□ 0.89
TNFSF13O75888 MIR6724-3-201ENST00000622482 92 ntBASIC20.63■□□□□ 0.89
TNFSF13O75888 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.63■□□□□ 0.89
TNFSF13O75888 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF13O75888 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF13O75888 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF13O75888 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF13O75888 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.62■□□□□ 0.89
TNFSF13O75888 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TNFSF13O75888 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TNFSF13O75888 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF13O75888 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF13O75888 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TNFSF13O75888 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF13O75888 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
TNFSF13O75888 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF13O75888 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.61■□□□□ 0.89
TNFSF13O75888 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF13O75888 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF13O75888 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.61■□□□□ 0.89
TNFSF13O75888 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF13O75888 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF13O75888 SNX5-217ENST00000606557 1087 ntBASIC20.6■□□□□ 0.89
TNFSF13O75888 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.6■□□□□ 0.89
TNFSF13O75888 AL117332.1-201ENST00000622628 974 ntBASIC20.6■□□□□ 0.89
TNFSF13O75888 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF13O75888 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.6■□□□□ 0.89
TNFSF13O75888 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF13O75888 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF13O75888 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF13O75888 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF13O75888 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.59■□□□□ 0.89
TNFSF13O75888 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF13O75888 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TNFSF13O75888 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TNFSF13O75888 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF13O75888 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF13O75888 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF13O75888 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.58■□□□□ 0.89
TNFSF13O75888 MIR3621-201ENST00000580529 85 ntBASIC20.58■□□□□ 0.89
TNFSF13O75888 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF13O75888 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.58■□□□□ 0.89
TNFSF13O75888 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF13O75888 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF13O75888 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFSF13O75888 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TNFSF13O75888 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF13O75888 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TNFSF13O75888 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
TNFSF13O75888 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TNFSF13O75888 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.57■□□□□ 0.88
TNFSF13O75888 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.57■□□□□ 0.88
TNFSF13O75888 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF13O75888 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF13O75888 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TNFSF13O75888 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.56■□□□□ 0.88
TNFSF13O75888 AC131281.2-201ENST00000520478 145 ntBASIC20.56■□□□□ 0.88
TNFSF13O75888 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF13O75888 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TNFSF13O75888 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF13O75888 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFSF13O75888 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFSF13O75888 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF13O75888 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF13O75888 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF13O75888 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF13O75888 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF13O75888 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms