Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PTP4A3O75365 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.07■□□□□ 0.96
PTP4A3O75365 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.06■□□□□ 0.96
PTP4A3O75365 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A3O75365 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PTP4A3O75365 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A3O75365 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A3O75365 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PTP4A3O75365 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A3O75365 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A3O75365 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PTP4A3O75365 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.06■□□□□ 0.96
PTP4A3O75365 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
PTP4A3O75365 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PTP4A3O75365 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PTP4A3O75365 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PTP4A3O75365 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTP4A3O75365 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PTP4A3O75365 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.04■□□□□ 0.96
PTP4A3O75365 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.04■□□□□ 0.96
PTP4A3O75365 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTP4A3O75365 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PTP4A3O75365 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A3O75365 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A3O75365 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A3O75365 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTP4A3O75365 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTP4A3O75365 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PTP4A3O75365 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTP4A3O75365 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTP4A3O75365 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTP4A3O75365 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.02■□□□□ 0.96
PTP4A3O75365 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.02■□□□□ 0.96
PTP4A3O75365 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PTP4A3O75365 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTP4A3O75365 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PTP4A3O75365 ABCB10P4-201ENST00000566803 2184 ntBASIC21.02■□□□□ 0.95
PTP4A3O75365 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.01■□□□□ 0.95
PTP4A3O75365 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTP4A3O75365 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PTP4A3O75365 RPS2P7-201ENST00000447334 885 ntBASIC21.01■□□□□ 0.95
PTP4A3O75365 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.01■□□□□ 0.95
PTP4A3O75365 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.01■□□□□ 0.95
PTP4A3O75365 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTP4A3O75365 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
PTP4A3O75365 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTP4A3O75365 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTP4A3O75365 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21■□□□□ 0.95
PTP4A3O75365 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTP4A3O75365 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21■□□□□ 0.95
PTP4A3O75365 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PTP4A3O75365 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PTP4A3O75365 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21■□□□□ 0.95
PTP4A3O75365 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21■□□□□ 0.95
PTP4A3O75365 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PTP4A3O75365 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A3O75365 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PTP4A3O75365 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
PTP4A3O75365 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTP4A3O75365 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTP4A3O75365 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A3O75365 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A3O75365 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A3O75365 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A3O75365 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTP4A3O75365 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A3O75365 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A3O75365 SPCS2P3-201ENST00000500401 656 ntBASIC20.98■□□□□ 0.95
PTP4A3O75365 AL592293.1-201ENST00000502889 1188 ntBASIC20.98■□□□□ 0.95
PTP4A3O75365 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A3O75365 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.98■□□□□ 0.95
PTP4A3O75365 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTP4A3O75365 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A3O75365 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A3O75365 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A3O75365 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A3O75365 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.97■□□□□ 0.95
PTP4A3O75365 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTP4A3O75365 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PTP4A3O75365 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A3O75365 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A3O75365 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.96■□□□□ 0.95
PTP4A3O75365 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A3O75365 AC018755.3-202ENST00000596210 929 ntBASIC20.96■□□□□ 0.95
PTP4A3O75365 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.96■□□□□ 0.95
PTP4A3O75365 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A3O75365 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A3O75365 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A3O75365 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PTP4A3O75365 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms