Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atf6F6VAN0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Atf6F6VAN0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atf6F6VAN0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atf6F6VAN0 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.59■■□□□ 1.05
Atf6F6VAN0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Atf6F6VAN0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atf6F6VAN0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atf6F6VAN0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Atf6F6VAN0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atf6F6VAN0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atf6F6VAN0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atf6F6VAN0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atf6F6VAN0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atf6F6VAN0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atf6F6VAN0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.57■■□□□ 1.04
Atf6F6VAN0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.57■■□□□ 1.04
Atf6F6VAN0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Atf6F6VAN0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.57■■□□□ 1.04
Atf6F6VAN0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.57■■□□□ 1.04
Atf6F6VAN0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Atf6F6VAN0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Atf6F6VAN0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atf6F6VAN0 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.56■■□□□ 1.04
Atf6F6VAN0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atf6F6VAN0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Atf6F6VAN0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Atf6F6VAN0 Gm45444-201ENSMUST00000211394 898 ntBASIC21.55■■□□□ 1.04
Atf6F6VAN0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Atf6F6VAN0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Atf6F6VAN0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Atf6F6VAN0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Atf6F6VAN0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Atf6F6VAN0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.54■■□□□ 1.04
Atf6F6VAN0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Atf6F6VAN0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atf6F6VAN0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.52■■□□□ 1.04
Atf6F6VAN0 Gm5921-201ENSMUST00000075898 882 ntBASIC21.52■■□□□ 1.04
Atf6F6VAN0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Atf6F6VAN0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Atf6F6VAN0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
Atf6F6VAN0 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.51■■□□□ 1.03
Atf6F6VAN0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atf6F6VAN0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atf6F6VAN0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atf6F6VAN0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Atf6F6VAN0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Atf6F6VAN0 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.51■■□□□ 1.03
Atf6F6VAN0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Atf6F6VAN0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Atf6F6VAN0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Atf6F6VAN0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atf6F6VAN0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atf6F6VAN0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Atf6F6VAN0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atf6F6VAN0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Atf6F6VAN0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Gm13238-201ENSMUST00000117655 780 ntBASIC21.49■■□□□ 1.03
Atf6F6VAN0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf6F6VAN0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atf6F6VAN0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Atf6F6VAN0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms