Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Gm5812-201ENSMUST00000061073 957 ntBASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Gm10232-201ENSMUST00000089221 720 ntBASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf4lE9Q2N0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4lE9Q2N0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4lE9Q2N0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cpsf4lE9Q2N0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf4lE9Q2N0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf4lE9Q2N0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.85■□□□□ 0.45
Cpsf4lE9Q2N0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Cpsf4lE9Q2N0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cpsf4lE9Q2N0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf4lE9Q2N0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.85■□□□□ 0.45
Cpsf4lE9Q2N0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Cpsf4lE9Q2N0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf4lE9Q2N0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf4lE9Q2N0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cpsf4lE9Q2N0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.83■□□□□ 0.44
Cpsf4lE9Q2N0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.83■□□□□ 0.44
Cpsf4lE9Q2N0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cpsf4lE9Q2N0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cpsf4lE9Q2N0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.82■□□□□ 0.44
Cpsf4lE9Q2N0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cpsf4lE9Q2N0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.8■□□□□ 0.44
Cpsf4lE9Q2N0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4lE9Q2N0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Cpsf4lE9Q2N0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.79■□□□□ 0.44
Cpsf4lE9Q2N0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.79■□□□□ 0.44
Cpsf4lE9Q2N0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4lE9Q2N0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cpsf4lE9Q2N0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.78■□□□□ 0.44
Cpsf4lE9Q2N0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4lE9Q2N0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4lE9Q2N0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cpsf4lE9Q2N0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cpsf4lE9Q2N0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.78■□□□□ 0.44
Cpsf4lE9Q2N0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4lE9Q2N0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4lE9Q2N0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4lE9Q2N0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.77■□□□□ 0.44
Cpsf4lE9Q2N0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpsf4lE9Q2N0 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.77■□□□□ 0.43
Cpsf4lE9Q2N0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.76■□□□□ 0.43
Cpsf4lE9Q2N0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms