Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmcn1D3YXG0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Nsd1-206ENSMUST00000224918 1001 ntBASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Hmcn1D3YXG0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Gm20760-201ENSMUST00000179197 648 ntBASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Gm7143-201ENSMUST00000222811 859 ntBASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmcn1D3YXG0 Gm40848-201ENSMUST00000221998 324 ntBASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Gm12527-201ENSMUST00000117967 564 ntBASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmcn1D3YXG0 Gm7199-201ENSMUST00000118327 1485 ntBASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Gm13181-201ENSMUST00000120117 1069 ntBASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Gm29994-201ENSMUST00000195495 1193 ntBASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Gm8770-201ENSMUST00000121113 1109 ntBASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hmcn1D3YXG0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmcn1D3YXG0 Gm8520-201ENSMUST00000186517 868 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 165.3 ms