Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3BA6NDS4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D3BA6NDS4 AL121749.1-202ENST00000609313 2153 ntBASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D3BA6NDS4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 AC092803.2-201ENST00000564287 1899 ntBASIC23.85■■□□□ 1.41
TBC1D3BA6NDS4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
TBC1D3BA6NDS4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.84■■□□□ 1.41
TBC1D3BA6NDS4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D3BA6NDS4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.84■■□□□ 1.41
TBC1D3BA6NDS4 AL139246.5-201ENST00000606645 996 ntBASIC23.84■■□□□ 1.41
TBC1D3BA6NDS4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TBC1D3BA6NDS4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.83■■□□□ 1.41
TBC1D3BA6NDS4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TBC1D3BA6NDS4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TBC1D3BA6NDS4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TBC1D3BA6NDS4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.4
TBC1D3BA6NDS4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TBC1D3BA6NDS4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TBC1D3BA6NDS4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3BA6NDS4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3BA6NDS4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TBC1D3BA6NDS4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.82■■□□□ 1.4
TBC1D3BA6NDS4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D3BA6NDS4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.82■■□□□ 1.4
TBC1D3BA6NDS4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 SNX5-217ENST00000606557 1087 ntBASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
TBC1D3BA6NDS4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 MIR638-201ENST00000385237 100 ntBASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 MIR4466-201ENST00000606121 54 ntBASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D3BA6NDS4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 MIR6722-201ENST00000617286 78 ntBASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.79■■□□□ 1.4
TBC1D3BA6NDS4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D3BA6NDS4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D3BA6NDS4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
TBC1D3BA6NDS4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.78■■□□□ 1.4
TBC1D3BA6NDS4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.78■■□□□ 1.4
TBC1D3BA6NDS4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D3BA6NDS4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D3BA6NDS4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3BA6NDS4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.77■■□□□ 1.4
TBC1D3BA6NDS4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3BA6NDS4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3BA6NDS4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TBC1D3BA6NDS4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.77■■□□□ 1.4
TBC1D3BA6NDS4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D3BA6NDS4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.76■■□□□ 1.39
TBC1D3BA6NDS4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.76■■□□□ 1.39
TBC1D3BA6NDS4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.76■■□□□ 1.39
TBC1D3BA6NDS4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D3BA6NDS4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3BA6NDS4 AL512631.2-201ENST00000604634 923 ntBASIC23.75■■□□□ 1.39
TBC1D3BA6NDS4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.75■■□□□ 1.39
TBC1D3BA6NDS4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.75■■□□□ 1.39
TBC1D3BA6NDS4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TBC1D3BA6NDS4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 AC096631.2-201ENST00000436136 790 ntBASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D3BA6NDS4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms