Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.37■□□□□ 0.21
Col6a5A6H584 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.37■□□□□ 0.21
Col6a5A6H584 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a5A6H584 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col6a5A6H584 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Col6a5A6H584 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a5A6H584 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.36■□□□□ 0.21
Col6a5A6H584 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a5A6H584 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.36■□□□□ 0.21
Col6a5A6H584 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a5A6H584 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a5A6H584 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col6a5A6H584 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a5A6H584 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.35■□□□□ 0.21
Col6a5A6H584 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.35■□□□□ 0.21
Col6a5A6H584 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.35■□□□□ 0.21
Col6a5A6H584 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a5A6H584 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col6a5A6H584 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a5A6H584 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a5A6H584 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.35■□□□□ 0.21
Col6a5A6H584 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.34■□□□□ 0.21
Col6a5A6H584 Gm43060-201ENSMUST00000200621 289 ntBASIC16.34■□□□□ 0.21
Col6a5A6H584 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col6a5A6H584 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Col6a5A6H584 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.34■□□□□ 0.21
Col6a5A6H584 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a5A6H584 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Col6a5A6H584 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col6a5A6H584 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a5A6H584 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a5A6H584 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Col6a5A6H584 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.33■□□□□ 0.2
Col6a5A6H584 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a5A6H584 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.32■□□□□ 0.2
Col6a5A6H584 Gm10602-201ENSMUST00000098239 609 ntBASIC16.32■□□□□ 0.2
Col6a5A6H584 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a5A6H584 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.32■□□□□ 0.2
Col6a5A6H584 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a5A6H584 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a5A6H584 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a5A6H584 Gm18671-201ENSMUST00000214826 683 ntBASIC16.32■□□□□ 0.2
Col6a5A6H584 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a5A6H584 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.32■□□□□ 0.2
Col6a5A6H584 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.32■□□□□ 0.2
Col6a5A6H584 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col6a5A6H584 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.32■□□□□ 0.2
Col6a5A6H584 Gm10252-201ENSMUST00000209541 832 ntBASIC16.32■□□□□ 0.2
Col6a5A6H584 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.32■□□□□ 0.2
Col6a5A6H584 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a5A6H584 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a5A6H584 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a5A6H584 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Col6a5A6H584 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col6a5A6H584 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col6a5A6H584 Gm7977-201ENSMUST00000193787 748 ntBASIC16.31■□□□□ 0.2
Col6a5A6H584 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a5A6H584 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col6a5A6H584 Gm27801-201ENSMUST00000184174 223 ntBASIC16.3■□□□□ 0.2
Col6a5A6H584 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.3■□□□□ 0.2
Col6a5A6H584 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.3■□□□□ 0.2
Col6a5A6H584 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a5A6H584 Amer2-203ENSMUST00000225247 2662 ntBASIC16.3■□□□□ 0.2
Col6a5A6H584 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a5A6H584 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.3■□□□□ 0.2
Col6a5A6H584 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a5A6H584 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.3■□□□□ 0.2
Col6a5A6H584 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col6a5A6H584 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.29■□□□□ 0.2
Col6a5A6H584 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a5A6H584 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a5A6H584 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a5A6H584 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a5A6H584 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a5A6H584 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.28■□□□□ 0.2
Col6a5A6H584 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.28■□□□□ 0.2
Col6a5A6H584 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.28■□□□□ 0.2
Col6a5A6H584 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a5A6H584 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a5A6H584 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a5A6H584 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a5A6H584 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.27■□□□□ 0.2
Col6a5A6H584 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a5A6H584 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a5A6H584 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.27■□□□□ 0.19
Col6a5A6H584 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a5A6H584 Gm22240-201ENSMUST00000175225 82 ntBASIC16.27■□□□□ 0.19
Col6a5A6H584 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a5A6H584 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a5A6H584 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a5A6H584 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a5A6H584 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a5A6H584 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms