Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rpl9-ps6A0A140T8T4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.68■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.67■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpl9-ps6A0A140T8T4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Gm22238-201ENSMUST00000175222 88 ntBASIC21.65■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Rpl9-ps6A0A140T8T4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.64■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.63■■□□□ 1.05
Rpl9-ps6A0A140T8T4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.63■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.62■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.6■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.58■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.58■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpl9-ps6A0A140T8T4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.58■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.57■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.56■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpl9-ps6A0A140T8T4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpl9-ps6A0A140T8T4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 169.7 ms