Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-4A0A0B4J246 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-4A0A0B4J246 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRAV8-4A0A0B4J246 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-4A0A0B4J246 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 RP9P-202ENST00000450133 1212 ntBASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV8-4A0A0B4J246 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 AC068473.5-201ENST00000616428 2072 ntBASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-4A0A0B4J246 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 AC096887.2-201ENST00000623443 1957 ntBASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-4A0A0B4J246 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 KRT18P10-201ENST00000388836 1287 ntBASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 GPX1-201ENST00000419349 1106 ntBASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-4A0A0B4J246 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV8-4A0A0B4J246 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 AC097639.1-201ENST00000565519 1891 ntBASIC16.14■□□□□ 0.17
TRAV8-4A0A0B4J246 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 AC007029.1-201ENST00000604183 313 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms